Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2202 and Dsui_2203 are separated by 94 nucleotides Dsui_2203 and Dsui_2204 are separated by 132 nucleotides
Dsui_2202: Dsui_2202 - parvulin-like peptidyl-prolyl isomerase, at 2,337,198 to 2,339,090
_2202
Dsui_2203: Dsui_2203 - enoyl-(acyl-carrier-protein) reductase (NADH), at 2,339,185 to 2,339,982
_2203
Dsui_2204: Dsui_2204 - ABC-type dipeptide transport system, periplasmic component, at 2,340,115 to 2,342,286
_2204
Position (kb)
2339
2340 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2338.217 kb on + strand, within Dsui_2202 at 2338.224 kb on + strand, within Dsui_2202 at 2338.306 kb on + strand, within Dsui_2202 at 2338.410 kb on - strand, within Dsui_2202 at 2338.498 kb on + strand, within Dsui_2202 at 2338.562 kb on + strand, within Dsui_2202 at 2338.594 kb on + strand, within Dsui_2202 at 2338.597 kb on + strand, within Dsui_2202 at 2338.612 kb on + strand, within Dsui_2202 at 2338.636 kb on + strand, within Dsui_2202 at 2338.644 kb on - strand, within Dsui_2202 at 2338.701 kb on + strand, within Dsui_2202 at 2338.765 kb on + strand, within Dsui_2202 at 2338.889 kb on - strand, within Dsui_2202 at 2338.918 kb on - strand at 2339.011 kb on + strand at 2339.054 kb on + strand at 2339.062 kb on - strand at 2339.062 kb on - strand at 2339.169 kb on + strand at 2340.105 kb on + strand at 2340.207 kb on + strand at 2340.207 kb on + strand at 2340.207 kb on + strand at 2340.215 kb on - strand at 2340.264 kb on + strand at 2340.283 kb on + strand at 2340.283 kb on + strand at 2340.288 kb on + strand at 2340.288 kb on + strand at 2340.291 kb on - strand at 2340.296 kb on - strand at 2340.364 kb on + strand, within Dsui_2204 at 2340.446 kb on + strand, within Dsui_2204 at 2340.454 kb on - strand, within Dsui_2204 at 2340.579 kb on + strand, within Dsui_2204 at 2340.580 kb on - strand at 2340.605 kb on + strand, within Dsui_2204 at 2340.637 kb on - strand at 2340.717 kb on + strand, within Dsui_2204 at 2340.717 kb on + strand, within Dsui_2204 at 2340.725 kb on - strand, within Dsui_2204 at 2340.800 kb on + strand, within Dsui_2204 at 2340.852 kb on + strand, within Dsui_2204 at 2340.960 kb on + strand, within Dsui_2204
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 2,338,217 + Dsui_2202 0.54 -3.2 2,338,224 + Dsui_2202 0.54 -0.6 2,338,306 + Dsui_2202 0.59 -2.0 2,338,410 - Dsui_2202 0.64 -1.1 2,338,498 + Dsui_2202 0.69 -1.8 2,338,562 + Dsui_2202 0.72 -2.6 2,338,594 + Dsui_2202 0.74 -1.1 2,338,597 + Dsui_2202 0.74 -1.4 2,338,612 + Dsui_2202 0.75 -1.6 2,338,636 + Dsui_2202 0.76 -2.5 2,338,644 - Dsui_2202 0.76 -1.4 2,338,701 + Dsui_2202 0.79 -3.7 2,338,765 + Dsui_2202 0.83 -2.6 2,338,889 - Dsui_2202 0.89 -0.7 2,338,918 - -1.4 2,339,011 + -1.4 2,339,054 + -0.1 2,339,062 - +0.9 2,339,062 - -0.1 2,339,169 + -0.1 2,340,105 + -0.7 2,340,207 + +0.9 2,340,207 + +0.9 2,340,207 + -2.1 2,340,215 - -0.7 2,340,264 + +0.9 2,340,283 + +1.9 2,340,283 + +0.6 2,340,288 + -1.4 2,340,288 + -1.1 2,340,291 - +0.9 2,340,296 - +0.9 2,340,364 + Dsui_2204 0.11 +2.7 2,340,446 + Dsui_2204 0.15 +0.2 2,340,454 - Dsui_2204 0.16 -0.1 2,340,579 + Dsui_2204 0.21 -1.1 2,340,580 - -0.1 2,340,605 + Dsui_2204 0.23 +0.9 2,340,637 - +0.9 2,340,717 + Dsui_2204 0.28 -1.2 2,340,717 + Dsui_2204 0.28 +2.2 2,340,725 - Dsui_2204 0.28 +0.9 2,340,800 + Dsui_2204 0.32 -0.1 2,340,852 + Dsui_2204 0.34 -1.4 2,340,960 + Dsui_2204 0.39 +2.3
Or see this region's nucleotide sequence