Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2138 and Dsui_2139 are separated by 136 nucleotides Dsui_2139 and Dsui_2140 overlap by 4 nucleotides Dsui_2140 and Dsui_2141 overlap by 1 nucleotides Dsui_2141 and Dsui_2142 overlap by 26 nucleotides
Dsui_2138: Dsui_2138 - putative esterase, at 2,266,997 to 2,267,665
_2138
Dsui_2139: Dsui_2139 - Protein of unknown function (DUF3348), at 2,267,802 to 2,268,530
_2139
Dsui_2140: Dsui_2140 - hypothetical protein, at 2,268,527 to 2,270,617
_2140
Dsui_2141: Dsui_2141 - flagellar motor protein, at 2,270,617 to 2,271,261
_2141
Dsui_2142: Dsui_2142 - Protein of unknown function (DUF2894), at 2,271,236 to 2,272,111
_2142
Position (kb)
2268
2269
2270
2271 Strain fitness (log2 ratio)
-1
0
1 at 2267.610 kb on + strand at 2267.707 kb on - strand at 2267.744 kb on + strand at 2267.745 kb on + strand at 2267.799 kb on - strand at 2268.130 kb on - strand at 2268.176 kb on - strand at 2268.290 kb on + strand, within Dsui_2139 at 2268.303 kb on + strand, within Dsui_2139 at 2268.349 kb on + strand, within Dsui_2139 at 2268.354 kb on + strand, within Dsui_2139 at 2268.432 kb on + strand, within Dsui_2139 at 2268.435 kb on + strand, within Dsui_2139 at 2268.552 kb on + strand at 2268.582 kb on + strand at 2268.587 kb on + strand at 2268.592 kb on + strand at 2268.601 kb on - strand at 2268.644 kb on + strand at 2268.664 kb on + strand at 2268.671 kb on - strand at 2268.697 kb on + strand at 2268.766 kb on - strand at 2268.931 kb on + strand, within Dsui_2140 at 2268.939 kb on + strand, within Dsui_2140 at 2268.939 kb on + strand, within Dsui_2140 at 2269.099 kb on - strand, within Dsui_2140 at 2269.431 kb on + strand, within Dsui_2140 at 2269.467 kb on + strand, within Dsui_2140 at 2269.542 kb on + strand, within Dsui_2140 at 2269.592 kb on + strand, within Dsui_2140 at 2269.670 kb on - strand, within Dsui_2140 at 2269.892 kb on - strand at 2269.986 kb on - strand at 2270.009 kb on + strand, within Dsui_2140 at 2270.014 kb on + strand, within Dsui_2140 at 2270.132 kb on + strand, within Dsui_2140 at 2270.214 kb on + strand, within Dsui_2140 at 2270.224 kb on + strand, within Dsui_2140 at 2270.381 kb on + strand, within Dsui_2140 at 2270.381 kb on + strand, within Dsui_2140 at 2270.393 kb on + strand, within Dsui_2140 at 2270.580 kb on + strand at 2270.634 kb on - strand at 2270.650 kb on + strand at 2270.699 kb on + strand, within Dsui_2141 at 2270.699 kb on + strand, within Dsui_2141 at 2270.753 kb on - strand, within Dsui_2141 at 2270.753 kb on - strand at 2270.815 kb on + strand, within Dsui_2141 at 2270.889 kb on + strand, within Dsui_2141 at 2271.020 kb on - strand, within Dsui_2141 at 2271.154 kb on - strand at 2271.264 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 2,267,610 + -0.1 2,267,707 - +0.9 2,267,744 + -0.6 2,267,745 + -0.5 2,267,799 - +0.9 2,268,130 - +0.9 2,268,176 - +0.9 2,268,290 + Dsui_2139 0.67 -0.6 2,268,303 + Dsui_2139 0.69 +0.4 2,268,349 + Dsui_2139 0.75 -0.3 2,268,354 + Dsui_2139 0.76 -0.5 2,268,432 + Dsui_2139 0.86 -0.6 2,268,435 + Dsui_2139 0.87 -0.7 2,268,552 + -0.6 2,268,582 + +0.4 2,268,587 + -0.2 2,268,592 + -0.1 2,268,601 - +0.9 2,268,644 + +0.6 2,268,664 + -0.2 2,268,671 - +0.9 2,268,697 + -0.5 2,268,766 - +0.9 2,268,931 + Dsui_2140 0.19 -0.1 2,268,939 + Dsui_2140 0.20 +0.1 2,268,939 + Dsui_2140 0.20 -1.1 2,269,099 - Dsui_2140 0.27 +0.9 2,269,431 + Dsui_2140 0.43 -0.3 2,269,467 + Dsui_2140 0.45 -0.4 2,269,542 + Dsui_2140 0.49 -0.2 2,269,592 + Dsui_2140 0.51 +0.3 2,269,670 - Dsui_2140 0.55 -0.1 2,269,892 - +0.9 2,269,986 - +0.9 2,270,009 + Dsui_2140 0.71 -0.9 2,270,014 + Dsui_2140 0.71 +0.3 2,270,132 + Dsui_2140 0.77 +1.6 2,270,214 + Dsui_2140 0.81 +0.4 2,270,224 + Dsui_2140 0.81 +0.4 2,270,381 + Dsui_2140 0.89 +0.5 2,270,381 + Dsui_2140 0.89 +0.8 2,270,393 + Dsui_2140 0.89 +0.3 2,270,580 + +0.6 2,270,634 - +0.9 2,270,650 + -0.0 2,270,699 + Dsui_2141 0.13 +0.1 2,270,699 + Dsui_2141 0.13 -0.0 2,270,753 - Dsui_2141 0.21 -1.7 2,270,753 - +0.9 2,270,815 + Dsui_2141 0.31 -0.8 2,270,889 + Dsui_2141 0.42 -0.7 2,271,020 - Dsui_2141 0.62 -0.1 2,271,154 - -0.1 2,271,264 - +0.9
Or see this region's nucleotide sequence