Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1996 and Dsui_1997 are separated by 22 nucleotides Dsui_1997 and Dsui_1998 are separated by 77 nucleotides Dsui_1998 and Dsui_1999 are separated by 11 nucleotides
Dsui_1996: Dsui_1996 - PhoH family protein, at 2,103,673 to 2,105,115
_1996
Dsui_1997: Dsui_1997 - Peroxiredoxin, at 2,105,138 to 2,105,611
_1997
Dsui_1998: Dsui_1998 - glutamate racemase, at 2,105,689 to 2,106,474
_1998
Dsui_1999: Dsui_1999 - putative translation initiation inhibitor, yjgF family, at 2,106,486 to 2,106,830
_1999
Position (kb)
2105
2106 Strain fitness (log2 ratio)
-2
-1
0
1 at 2104.145 kb on - strand, within Dsui_1996 at 2104.155 kb on - strand, within Dsui_1996 at 2104.224 kb on - strand, within Dsui_1996 at 2104.226 kb on + strand, within Dsui_1996 at 2104.236 kb on + strand, within Dsui_1996 at 2104.341 kb on + strand, within Dsui_1996 at 2104.349 kb on - strand, within Dsui_1996 at 2104.395 kb on + strand, within Dsui_1996 at 2104.407 kb on - strand, within Dsui_1996 at 2104.446 kb on + strand at 2104.514 kb on - strand, within Dsui_1996 at 2104.516 kb on - strand, within Dsui_1996 at 2104.562 kb on + strand, within Dsui_1996 at 2104.562 kb on + strand at 2104.562 kb on + strand at 2104.562 kb on + strand, within Dsui_1996 at 2104.570 kb on - strand, within Dsui_1996 at 2104.570 kb on - strand, within Dsui_1996 at 2104.570 kb on - strand, within Dsui_1996 at 2104.628 kb on - strand, within Dsui_1996 at 2104.636 kb on - strand, within Dsui_1996 at 2104.727 kb on - strand, within Dsui_1996 at 2104.742 kb on - strand, within Dsui_1996 at 2104.742 kb on - strand, within Dsui_1996 at 2104.751 kb on + strand, within Dsui_1996 at 2104.751 kb on + strand, within Dsui_1996 at 2104.759 kb on - strand, within Dsui_1996 at 2104.759 kb on - strand, within Dsui_1996 at 2104.872 kb on - strand, within Dsui_1996 at 2104.875 kb on + strand at 2104.881 kb on + strand, within Dsui_1996 at 2104.881 kb on + strand, within Dsui_1996 at 2104.881 kb on + strand, within Dsui_1996 at 2104.889 kb on - strand, within Dsui_1996 at 2104.894 kb on - strand, within Dsui_1996 at 2104.956 kb on - strand, within Dsui_1996 at 2105.010 kb on - strand at 2105.090 kb on - strand at 2105.144 kb on - strand at 2105.144 kb on - strand at 2105.144 kb on - strand at 2105.248 kb on + strand at 2105.253 kb on + strand at 2105.253 kb on + strand at 2105.255 kb on + strand at 2105.261 kb on - strand, within Dsui_1997 at 2105.261 kb on - strand, within Dsui_1997 at 2105.314 kb on - strand, within Dsui_1997 at 2105.396 kb on - strand at 2105.541 kb on - strand, within Dsui_1997 at 2105.611 kb on + strand at 2105.661 kb on + strand at 2105.661 kb on + strand at 2105.687 kb on + strand at 2105.687 kb on + strand at 2105.687 kb on + strand at 2105.695 kb on - strand at 2105.706 kb on - strand at 2106.499 kb on + strand at 2106.515 kb on - strand at 2106.517 kb on - strand at 2106.523 kb on - strand, within Dsui_1999 at 2106.588 kb on + strand, within Dsui_1999 at 2106.608 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 2,104,145 - Dsui_1996 0.33 -0.0 2,104,155 - Dsui_1996 0.33 +0.5 2,104,224 - Dsui_1996 0.38 -0.4 2,104,226 + Dsui_1996 0.38 -1.3 2,104,236 + Dsui_1996 0.39 -2.4 2,104,341 + Dsui_1996 0.46 +0.1 2,104,349 - Dsui_1996 0.47 +1.5 2,104,395 + Dsui_1996 0.50 -0.5 2,104,407 - Dsui_1996 0.51 -0.5 2,104,446 + +0.1 2,104,514 - Dsui_1996 0.58 -0.2 2,104,516 - Dsui_1996 0.58 +0.4 2,104,562 + Dsui_1996 0.62 -0.5 2,104,562 + +0.1 2,104,562 + +0.1 2,104,562 + Dsui_1996 0.62 +1.1 2,104,570 - Dsui_1996 0.62 +0.5 2,104,570 - Dsui_1996 0.62 +0.3 2,104,570 - Dsui_1996 0.62 -0.0 2,104,628 - Dsui_1996 0.66 +0.1 2,104,636 - Dsui_1996 0.67 -0.4 2,104,727 - Dsui_1996 0.73 -0.4 2,104,742 - Dsui_1996 0.74 -1.6 2,104,742 - Dsui_1996 0.74 -0.5 2,104,751 + Dsui_1996 0.75 -0.5 2,104,751 + Dsui_1996 0.75 +0.1 2,104,759 - Dsui_1996 0.75 -1.2 2,104,759 - Dsui_1996 0.75 -0.0 2,104,872 - Dsui_1996 0.83 -0.4 2,104,875 + +1.1 2,104,881 + Dsui_1996 0.84 -0.9 2,104,881 + Dsui_1996 0.84 -0.9 2,104,881 + Dsui_1996 0.84 +1.1 2,104,889 - Dsui_1996 0.84 -0.3 2,104,894 - Dsui_1996 0.85 -0.4 2,104,956 - Dsui_1996 0.89 -1.3 2,105,010 - +0.3 2,105,090 - -1.9 2,105,144 - +0.5 2,105,144 - -0.0 2,105,144 - -0.6 2,105,248 + -0.5 2,105,253 + -0.5 2,105,253 + -0.5 2,105,255 + +0.1 2,105,261 - Dsui_1997 0.26 -0.4 2,105,261 - Dsui_1997 0.26 -1.2 2,105,314 - Dsui_1997 0.37 -1.8 2,105,396 - +1.1 2,105,541 - Dsui_1997 0.85 +0.5 2,105,611 + +1.1 2,105,661 + -0.5 2,105,661 + +0.1 2,105,687 + +0.1 2,105,687 + -0.5 2,105,687 + +0.1 2,105,695 - -0.8 2,105,706 - -0.9 2,106,499 + +1.1 2,106,515 - +0.1 2,106,517 - +0.3 2,106,523 - Dsui_1999 0.11 +0.4 2,106,588 + Dsui_1999 0.30 -1.3 2,106,608 - +0.5
Or see this region's nucleotide sequence