Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1977 and Dsui_1978 are separated by 13 nucleotides Dsui_1978 and Dsui_1979 are separated by 12 nucleotides
Dsui_1977: Dsui_1977 - dihydrodipicolinate synthase, at 2,085,978 to 2,086,856
_1977
Dsui_1978: Dsui_1978 - putative lipoprotein, at 2,086,870 to 2,088,003
_1978
Dsui_1979: Dsui_1979 - metal-dependent hydrolase, beta-lactamase superfamily I, at 2,088,016 to 2,088,783
_1979
Position (kb)
2086
2087
2088
2089 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2085.872 kb on - strand at 2085.890 kb on + strand at 2085.890 kb on + strand at 2085.895 kb on + strand at 2085.898 kb on - strand at 2085.898 kb on - strand at 2085.910 kb on + strand at 2085.910 kb on + strand at 2085.910 kb on + strand at 2085.910 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on - strand at 2085.931 kb on - strand at 2085.938 kb on + strand at 2087.754 kb on + strand, within Dsui_1978 at 2087.754 kb on + strand, within Dsui_1978 at 2087.907 kb on + strand at 2088.182 kb on - strand, within Dsui_1979 at 2088.204 kb on - strand, within Dsui_1979 at 2088.308 kb on - strand, within Dsui_1979 at 2088.324 kb on + strand, within Dsui_1979 at 2088.324 kb on + strand, within Dsui_1979 at 2088.332 kb on - strand, within Dsui_1979 at 2088.332 kb on - strand, within Dsui_1979 at 2088.455 kb on + strand, within Dsui_1979 at 2088.482 kb on + strand, within Dsui_1979 at 2088.490 kb on - strand, within Dsui_1979 at 2088.550 kb on + strand, within Dsui_1979 at 2088.626 kb on + strand, within Dsui_1979 at 2088.685 kb on - strand, within Dsui_1979 at 2088.685 kb on - strand, within Dsui_1979 at 2088.709 kb on + strand at 2088.717 kb on - strand at 2088.727 kb on + strand at 2088.790 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 2,085,872 - -0.5 2,085,890 + -0.2 2,085,890 + +0.5 2,085,895 + +0.1 2,085,898 - +1.1 2,085,898 - +1.1 2,085,910 + -0.6 2,085,910 + -1.1 2,085,910 + -2.2 2,085,910 + -0.5 2,085,918 + +1.2 2,085,918 + -0.1 2,085,918 + -0.5 2,085,918 + -1.4 2,085,918 + -0.3 2,085,918 - +1.1 2,085,931 - +1.1 2,085,938 + +1.7 2,087,754 + Dsui_1978 0.78 -3.6 2,087,754 + Dsui_1978 0.78 -2.6 2,087,907 + -1.5 2,088,182 - Dsui_1979 0.22 -2.5 2,088,204 - Dsui_1979 0.24 +2.4 2,088,308 - Dsui_1979 0.38 +1.1 2,088,324 + Dsui_1979 0.40 -0.5 2,088,324 + Dsui_1979 0.40 -0.3 2,088,332 - Dsui_1979 0.41 +0.1 2,088,332 - Dsui_1979 0.41 -1.2 2,088,455 + Dsui_1979 0.57 -0.5 2,088,482 + Dsui_1979 0.61 -0.1 2,088,490 - Dsui_1979 0.62 -1.5 2,088,550 + Dsui_1979 0.70 +0.3 2,088,626 + Dsui_1979 0.79 -0.8 2,088,685 - Dsui_1979 0.87 -1.6 2,088,685 - Dsui_1979 0.87 -0.5 2,088,709 + +0.1 2,088,717 - -2.2 2,088,727 + -0.4 2,088,790 - -0.5
Or see this region's nucleotide sequence