Strain Fitness in Dechlorosoma suillum PS around Dsui_1882
Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0009 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,979,196 | + | Dsui_1881 | 0.57 | +2.3 | |
1,979,211 | - | Dsui_1881 | 0.57 | -0.7 | |
1,979,211 | - | Dsui_1881 | 0.57 | -0.7 | |
1,979,539 | + | Dsui_1881 | 0.74 | -0.1 | |
1,979,782 | + | Dsui_1881 | 0.85 | -0.4 | |
1,979,790 | - | Dsui_1881 | 0.86 | -1.1 | |
1,979,897 | - | -2.1 | |||
1,979,911 | + | -0.6 | |||
1,979,919 | - | -0.7 | |||
1,979,984 | - | -0.1 | |||
1,980,000 | - | +0.9 | |||
1,980,032 | - | -0.1 | |||
1,980,062 | - | +0.9 | |||
1,980,174 | - | -0.4 | |||
1,980,268 | + | Dsui_1882 | 0.26 | -0.1 | |
1,980,302 | + | Dsui_1882 | 0.33 | -0.1 | |
1,980,305 | - | Dsui_1882 | 0.33 | -2.3 | |
1,980,404 | - | Dsui_1882 | 0.53 | -0.4 | |
1,980,585 | + | Dsui_1882 | 0.89 | -0.7 | |
1,980,585 | + | Dsui_1882 | 0.89 | -1.4 | |
1,980,647 | - | -1.0 | |||
1,980,702 | + | +0.9 | |||
1,980,883 | - | -1.1 | |||
1,980,889 | - | +0.9 | |||
1,980,973 | + | Dsui_1883 | 0.12 | -0.4 | |
1,981,021 | + | Dsui_1883 | 0.15 | +0.5 | |
1,981,021 | + | Dsui_1883 | 0.15 | -0.2 | |
1,981,120 | - | Dsui_1883 | 0.20 | -1.1 | |
1,981,147 | - | Dsui_1883 | 0.21 | -0.1 | |
1,981,160 | + | Dsui_1883 | 0.22 | +0.5 | |
1,981,362 | - | Dsui_1883 | 0.32 | +0.9 | |
1,981,362 | - | Dsui_1883 | 0.32 | -0.7 | |
1,981,556 | - | Dsui_1883 | 0.42 | -0.7 |
Or see this region's nucleotide sequence