Strain Fitness in Dechlorosoma suillum PS around Dsui_1855
Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0009 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,949,126 | + | +0.8 | |||
1,949,188 | - | +0.8 | |||
1,949,212 | - | Dsui_1854 | 0.71 | -0.2 | |
1,949,214 | - | -0.2 | |||
1,949,240 | - | +0.8 | |||
1,949,535 | + | -1.2 | |||
1,949,608 | + | -0.2 | |||
1,949,969 | - | +0.8 | |||
1,950,089 | - | Dsui_1855 | 0.13 | -2.5 | |
1,950,089 | - | Dsui_1855 | 0.13 | -0.8 | |
1,950,099 | - | -0.8 | |||
1,950,342 | + | -0.2 | |||
1,950,521 | + | +0.8 | |||
1,950,589 | + | Dsui_1855 | 0.67 | -0.2 | |
1,950,590 | - | +0.8 | |||
1,950,630 | - | +0.8 | |||
1,950,637 | + | Dsui_1855 | 0.72 | -2.7 | |
1,950,675 | - | +0.8 | |||
1,950,739 | - | +0.8 | |||
1,950,815 | - | -1.2 | |||
1,951,000 | - | -2.4 | |||
1,951,074 | - | +0.8 | |||
1,951,182 | + | Dsui_1856 | 0.84 | -1.5 | |
1,951,227 | - | -1.5 | |||
1,951,368 | - | Dsui_1857 | 0.18 | -2.0 | |
1,951,376 | - | +0.8 | |||
1,951,385 | + | +0.8 | |||
1,951,440 | - | +0.8 | |||
1,951,536 | + | -0.8 | |||
1,951,544 | - | Dsui_1857 | 0.38 | +0.8 | |
1,951,572 | - | Dsui_1857 | 0.41 | -0.2 | |
1,951,611 | + | Dsui_1857 | 0.45 | -0.2 | |
1,951,845 | + | +0.8 | |||
1,951,896 | - | -0.2 |
Or see this region's nucleotide sequence