Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1756 and Dsui_1757 are separated by 137 nucleotides Dsui_1757 and Dsui_1758 are separated by 7 nucleotides
Dsui_1756: Dsui_1756 - flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF, at 1,842,313 to 1,844,064
_1756
Dsui_1757: Dsui_1757 - signal transduction histidine kinase, at 1,844,202 to 1,845,407
_1757
Dsui_1758: Dsui_1758 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,845,415 to 1,846,839
_1758
Position (kb)
1844
1845
1846 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1843.300 kb on + strand, within Dsui_1756 at 1843.336 kb on + strand, within Dsui_1756 at 1843.373 kb on + strand, within Dsui_1756 at 1843.469 kb on - strand, within Dsui_1756 at 1843.472 kb on - strand, within Dsui_1756 at 1843.490 kb on + strand, within Dsui_1756 at 1843.494 kb on + strand, within Dsui_1756 at 1843.558 kb on - strand, within Dsui_1756 at 1843.588 kb on - strand, within Dsui_1756 at 1843.598 kb on + strand, within Dsui_1756 at 1843.631 kb on - strand, within Dsui_1756 at 1843.692 kb on + strand, within Dsui_1756 at 1843.802 kb on - strand, within Dsui_1756 at 1843.811 kb on + strand, within Dsui_1756 at 1843.811 kb on + strand, within Dsui_1756 at 1843.821 kb on + strand, within Dsui_1756 at 1843.829 kb on - strand, within Dsui_1756 at 1843.878 kb on - strand, within Dsui_1756 at 1843.913 kb on - strand at 1843.946 kb on + strand at 1843.981 kb on + strand at 1843.981 kb on + strand at 1843.981 kb on + strand at 1843.981 kb on + strand at 1843.981 kb on + strand at 1843.989 kb on - strand at 1844.043 kb on - strand at 1844.045 kb on - strand at 1844.055 kb on - strand at 1844.055 kb on - strand at 1844.074 kb on - strand at 1844.097 kb on + strand at 1844.097 kb on - strand at 1844.105 kb on - strand at 1844.112 kb on + strand at 1844.112 kb on + strand at 1844.112 kb on + strand at 1844.120 kb on - strand at 1844.120 kb on - strand at 1844.184 kb on + strand at 1844.184 kb on + strand at 1844.216 kb on + strand at 1844.216 kb on + strand at 1844.226 kb on + strand at 1844.257 kb on - strand at 1844.309 kb on + strand at 1844.408 kb on + strand, within Dsui_1757 at 1844.408 kb on + strand, within Dsui_1757 at 1844.429 kb on + strand, within Dsui_1757 at 1844.437 kb on - strand, within Dsui_1757 at 1844.457 kb on + strand, within Dsui_1757 at 1844.467 kb on - strand at 1844.515 kb on + strand, within Dsui_1757 at 1844.529 kb on + strand, within Dsui_1757 at 1844.583 kb on + strand, within Dsui_1757 at 1844.628 kb on + strand, within Dsui_1757 at 1844.674 kb on + strand, within Dsui_1757 at 1844.693 kb on + strand, within Dsui_1757 at 1844.730 kb on + strand, within Dsui_1757 at 1844.752 kb on + strand, within Dsui_1757 at 1844.784 kb on + strand, within Dsui_1757 at 1844.799 kb on + strand, within Dsui_1757 at 1844.913 kb on + strand, within Dsui_1757 at 1844.974 kb on + strand, within Dsui_1757 at 1844.982 kb on + strand, within Dsui_1757 at 1845.020 kb on + strand, within Dsui_1757 at 1845.054 kb on + strand, within Dsui_1757 at 1845.059 kb on + strand, within Dsui_1757 at 1845.061 kb on - strand at 1845.108 kb on + strand, within Dsui_1757 at 1845.108 kb on + strand, within Dsui_1757 at 1845.116 kb on - strand, within Dsui_1757 at 1845.119 kb on - strand, within Dsui_1757 at 1845.159 kb on + strand, within Dsui_1757 at 1845.438 kb on + strand at 1845.490 kb on - strand at 1845.563 kb on - strand, within Dsui_1758 at 1845.599 kb on - strand, within Dsui_1758 at 1845.602 kb on + strand, within Dsui_1758 at 1845.620 kb on - strand, within Dsui_1758 at 1845.673 kb on + strand, within Dsui_1758 at 1845.696 kb on - strand at 1845.746 kb on - strand at 1845.750 kb on + strand, within Dsui_1758 at 1845.869 kb on + strand, within Dsui_1758 at 1845.879 kb on + strand, within Dsui_1758 at 1845.899 kb on - strand at 1845.908 kb on - strand, within Dsui_1758 at 1845.969 kb on + strand, within Dsui_1758 at 1845.984 kb on + strand, within Dsui_1758 at 1846.050 kb on + strand, within Dsui_1758 at 1846.085 kb on - strand, within Dsui_1758 at 1846.256 kb on - strand, within Dsui_1758 at 1846.319 kb on + strand, within Dsui_1758 at 1846.327 kb on - strand, within Dsui_1758
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 1,843,300 + Dsui_1756 0.56 -0.4 1,843,336 + Dsui_1756 0.58 -1.4 1,843,373 + Dsui_1756 0.61 -1.7 1,843,469 - Dsui_1756 0.66 -0.4 1,843,472 - Dsui_1756 0.66 -0.2 1,843,490 + Dsui_1756 0.67 -1.7 1,843,494 + Dsui_1756 0.67 +0.6 1,843,558 - Dsui_1756 0.71 +0.4 1,843,588 - Dsui_1756 0.73 +0.4 1,843,598 + Dsui_1756 0.73 -1.0 1,843,631 - Dsui_1756 0.75 -0.4 1,843,692 + Dsui_1756 0.79 -2.5 1,843,802 - Dsui_1756 0.85 -0.4 1,843,811 + Dsui_1756 0.86 -2.0 1,843,811 + Dsui_1756 0.86 -1.0 1,843,821 + Dsui_1756 0.86 -1.4 1,843,829 - Dsui_1756 0.87 +0.7 1,843,878 - Dsui_1756 0.89 -0.1 1,843,913 - -0.3 1,843,946 + -2.2 1,843,981 + +0.6 1,843,981 + -1.4 1,843,981 + -2.4 1,843,981 + -1.0 1,843,981 + -1.4 1,843,989 - -0.3 1,844,043 - -0.3 1,844,045 - -0.6 1,844,055 - -0.3 1,844,055 - -1.5 1,844,074 - -0.1 1,844,097 + -0.4 1,844,097 - +0.3 1,844,105 - -0.7 1,844,112 + -0.9 1,844,112 + -0.4 1,844,112 + -1.4 1,844,120 - -0.1 1,844,120 - -1.1 1,844,184 + +0.6 1,844,184 + +0.6 1,844,216 + -0.6 1,844,216 + +1.2 1,844,226 + -0.1 1,844,257 - +0.6 1,844,309 + -3.9 1,844,408 + Dsui_1757 0.17 +1.1 1,844,408 + Dsui_1757 0.17 -0.4 1,844,429 + Dsui_1757 0.19 -1.7 1,844,437 - Dsui_1757 0.19 -1.9 1,844,457 + Dsui_1757 0.21 -0.2 1,844,467 - +0.6 1,844,515 + Dsui_1757 0.26 -1.0 1,844,529 + Dsui_1757 0.27 -1.0 1,844,583 + Dsui_1757 0.32 -1.2 1,844,628 + Dsui_1757 0.35 -3.2 1,844,674 + Dsui_1757 0.39 -0.6 1,844,693 + Dsui_1757 0.41 -1.4 1,844,730 + Dsui_1757 0.44 -0.8 1,844,752 + Dsui_1757 0.46 -1.4 1,844,784 + Dsui_1757 0.48 -0.8 1,844,799 + Dsui_1757 0.50 -1.8 1,844,913 + Dsui_1757 0.59 -0.6 1,844,974 + Dsui_1757 0.64 +0.1 1,844,982 + Dsui_1757 0.65 +0.5 1,845,020 + Dsui_1757 0.68 -0.2 1,845,054 + Dsui_1757 0.71 -1.0 1,845,059 + Dsui_1757 0.71 +0.4 1,845,061 - +0.6 1,845,108 + Dsui_1757 0.75 -0.8 1,845,108 + Dsui_1757 0.75 -0.3 1,845,116 - Dsui_1757 0.76 +0.5 1,845,119 - Dsui_1757 0.76 +0.6 1,845,159 + Dsui_1757 0.79 -0.3 1,845,438 + -0.5 1,845,490 - -0.9 1,845,563 - Dsui_1758 0.10 -1.4 1,845,599 - Dsui_1758 0.13 -0.9 1,845,602 + Dsui_1758 0.13 -0.2 1,845,620 - Dsui_1758 0.14 -1.4 1,845,673 + Dsui_1758 0.18 -0.5 1,845,696 - +0.6 1,845,746 - +0.6 1,845,750 + Dsui_1758 0.24 +0.3 1,845,869 + Dsui_1758 0.32 -0.1 1,845,879 + Dsui_1758 0.33 -0.4 1,845,899 - +0.6 1,845,908 - Dsui_1758 0.35 +0.6 1,845,969 + Dsui_1758 0.39 +0.3 1,845,984 + Dsui_1758 0.40 +0.6 1,846,050 + Dsui_1758 0.45 -0.8 1,846,085 - Dsui_1758 0.47 -1.4 1,846,256 - Dsui_1758 0.59 -0.4 1,846,319 + Dsui_1758 0.63 +0.2 1,846,327 - Dsui_1758 0.64 +0.6
Or see this region's nucleotide sequence