Strain Fitness in Dechlorosoma suillum PS around Dsui_1590
Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0009 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,669,610 | - | Dsui_1588 | 0.71 | +0.5 | |
1,669,790 | + | Dsui_1588 | 0.89 | -1.0 | |
1,669,884 | + | -1.0 | |||
1,669,961 | + | -1.3 | |||
1,670,068 | - | Dsui_1589 | 0.25 | +0.5 | |
1,670,075 | + | Dsui_1589 | 0.26 | -2.7 | |
1,670,110 | - | -1.1 | |||
1,670,186 | + | Dsui_1589 | 0.42 | -1.8 | |
1,670,238 | + | Dsui_1589 | 0.50 | -2.1 | |
1,670,479 | + | Dsui_1589 | 0.85 | -3.2 | |
1,670,483 | + | Dsui_1589 | 0.85 | -0.5 | |
1,670,500 | + | Dsui_1589 | 0.88 | -1.6 | |
1,670,576 | + | -0.4 | |||
1,670,807 | - | +0.5 | |||
1,670,814 | + | Dsui_1590 | 0.80 | -0.2 | |
1,670,819 | + | Dsui_1590 | 0.82 | -0.8 | |
1,670,819 | + | Dsui_1590 | 0.82 | -0.3 | |
1,670,850 | + | -1.0 | |||
1,670,850 | + | +0.1 | |||
1,670,850 | + | -0.8 | |||
1,670,858 | - | -1.8 | |||
1,670,858 | - | -0.5 | |||
1,670,914 | - | -0.6 | |||
1,671,246 | + | Dsui_1591 | 0.20 | -2.5 | |
1,671,555 | + | Dsui_1591 | 0.44 | +0.2 | |
1,671,555 | + | Dsui_1591 | 0.44 | +0.2 | |
1,671,673 | + | Dsui_1591 | 0.53 | -2.2 | |
1,671,685 | + | Dsui_1591 | 0.54 | -0.5 | |
1,671,855 | + | Dsui_1591 | 0.67 | -0.8 |
Or see this region's nucleotide sequence