Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1147 and Dsui_1148 are separated by 10 nucleotides Dsui_1148 and Dsui_1149 are separated by 178 nucleotides
Dsui_1147: Dsui_1147 - PAS domain S-box, at 1,202,101 to 1,203,474
_1147
Dsui_1148: Dsui_1148 - putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain, at 1,203,485 to 1,203,973
_1148
Dsui_1149: Dsui_1149 - Zn-dependent protease with chaperone function, at 1,204,152 to 1,205,033
_1149
Position (kb)
1203
1204 Strain fitness (log2 ratio)
-2
-1
0
1 at 1202.656 kb on - strand, within Dsui_1147 at 1202.728 kb on + strand, within Dsui_1147 at 1202.728 kb on + strand, within Dsui_1147 at 1202.736 kb on - strand, within Dsui_1147 at 1202.796 kb on + strand, within Dsui_1147 at 1202.810 kb on + strand, within Dsui_1147 at 1202.904 kb on - strand, within Dsui_1147 at 1203.203 kb on + strand, within Dsui_1147 at 1203.295 kb on + strand at 1203.302 kb on - strand, within Dsui_1147 at 1203.313 kb on - strand, within Dsui_1147 at 1203.315 kb on + strand, within Dsui_1147 at 1203.346 kb on + strand at 1203.630 kb on + strand, within Dsui_1148 at 1203.650 kb on - strand, within Dsui_1148 at 1203.846 kb on - strand, within Dsui_1148 at 1203.890 kb on - strand, within Dsui_1148 at 1204.109 kb on + strand at 1204.427 kb on + strand, within Dsui_1149 at 1204.435 kb on - strand, within Dsui_1149 at 1204.447 kb on - strand, within Dsui_1149 at 1204.561 kb on - strand, within Dsui_1149 at 1204.605 kb on + strand, within Dsui_1149 at 1204.622 kb on + strand, within Dsui_1149 at 1204.820 kb on + strand, within Dsui_1149 at 1204.859 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 1,202,656 - Dsui_1147 0.40 -1.6 1,202,728 + Dsui_1147 0.46 +0.5 1,202,728 + Dsui_1147 0.46 -1.8 1,202,736 - Dsui_1147 0.46 -0.9 1,202,796 + Dsui_1147 0.51 -1.1 1,202,810 + Dsui_1147 0.52 -1.1 1,202,904 - Dsui_1147 0.58 -0.4 1,203,203 + Dsui_1147 0.80 -1.1 1,203,295 + +0.5 1,203,302 - Dsui_1147 0.87 -2.6 1,203,313 - Dsui_1147 0.88 -1.2 1,203,315 + Dsui_1147 0.88 -1.5 1,203,346 + +0.5 1,203,630 + Dsui_1148 0.30 -1.1 1,203,650 - Dsui_1148 0.34 -1.9 1,203,846 - Dsui_1148 0.74 -0.0 1,203,890 - Dsui_1148 0.83 -0.7 1,204,109 + -0.5 1,204,427 + Dsui_1149 0.31 +0.5 1,204,435 - Dsui_1149 0.32 -1.5 1,204,447 - Dsui_1149 0.33 -1.8 1,204,561 - Dsui_1149 0.46 +0.5 1,204,605 + Dsui_1149 0.51 -1.1 1,204,622 + Dsui_1149 0.53 -0.5 1,204,820 + Dsui_1149 0.76 -2.5 1,204,859 + +0.5
Or see this region's nucleotide sequence