Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1022 and Dsui_1023 overlap by 4 nucleotides Dsui_1023 and Dsui_1024 are separated by 13 nucleotides
Dsui_1022: Dsui_1022 - cell division protein, at 1,054,727 to 1,055,632
_1022
Dsui_1023: Dsui_1023 - putative ATPase involved in cell division, at 1,055,629 to 1,056,309
_1023
Dsui_1024: Dsui_1024 - signal recognition particle-docking protein FtsY, at 1,056,323 to 1,057,327
_1024
Position (kb)
1055
1056
1057 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1054.750 kb on + strand at 1054.758 kb on - strand at 1054.761 kb on + strand at 1054.764 kb on - strand at 1054.764 kb on - strand at 1054.774 kb on - strand at 1054.818 kb on - strand, within Dsui_1022 at 1055.044 kb on - strand, within Dsui_1022 at 1055.167 kb on - strand, within Dsui_1022 at 1055.193 kb on - strand, within Dsui_1022 at 1055.193 kb on - strand, within Dsui_1022 at 1055.235 kb on - strand, within Dsui_1022 at 1055.442 kb on - strand, within Dsui_1022 at 1055.487 kb on - strand, within Dsui_1022 at 1055.527 kb on - strand, within Dsui_1022 at 1055.556 kb on + strand at 1055.564 kb on - strand at 1055.639 kb on + strand at 1055.765 kb on + strand, within Dsui_1023 at 1055.765 kb on + strand, within Dsui_1023 at 1055.765 kb on + strand, within Dsui_1023 at 1055.765 kb on + strand, within Dsui_1023 at 1055.773 kb on - strand, within Dsui_1023 at 1055.773 kb on - strand, within Dsui_1023 at 1055.778 kb on - strand, within Dsui_1023 at 1055.848 kb on + strand, within Dsui_1023 at 1055.856 kb on - strand, within Dsui_1023 at 1055.883 kb on - strand, within Dsui_1023 at 1055.912 kb on + strand, within Dsui_1023 at 1055.936 kb on + strand, within Dsui_1023 at 1055.941 kb on + strand, within Dsui_1023 at 1055.973 kb on + strand, within Dsui_1023 at 1056.004 kb on - strand, within Dsui_1023 at 1056.073 kb on + strand, within Dsui_1023 at 1056.124 kb on + strand, within Dsui_1023 at 1056.129 kb on + strand at 1056.139 kb on + strand, within Dsui_1023 at 1056.170 kb on + strand, within Dsui_1023 at 1056.188 kb on - strand, within Dsui_1023 at 1056.261 kb on - strand at 1056.283 kb on + strand at 1056.283 kb on - strand at 1056.291 kb on - strand at 1056.314 kb on + strand at 1056.348 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 1,054,750 + +0.6 1,054,758 - -0.4 1,054,761 + -1.4 1,054,764 - -0.4 1,054,764 - -0.3 1,054,774 - -1.8 1,054,818 - Dsui_1022 0.10 -1.5 1,055,044 - Dsui_1022 0.35 -0.4 1,055,167 - Dsui_1022 0.49 -0.9 1,055,193 - Dsui_1022 0.51 -1.0 1,055,193 - Dsui_1022 0.51 -1.0 1,055,235 - Dsui_1022 0.56 -0.9 1,055,442 - Dsui_1022 0.79 -1.1 1,055,487 - Dsui_1022 0.84 -0.7 1,055,527 - Dsui_1022 0.88 -1.6 1,055,556 + -1.0 1,055,564 - -1.4 1,055,639 + -0.4 1,055,765 + Dsui_1023 0.20 +0.6 1,055,765 + Dsui_1023 0.20 -0.4 1,055,765 + Dsui_1023 0.20 -0.4 1,055,765 + Dsui_1023 0.20 -1.0 1,055,773 - Dsui_1023 0.21 -0.8 1,055,773 - Dsui_1023 0.21 -1.4 1,055,778 - Dsui_1023 0.22 -0.4 1,055,848 + Dsui_1023 0.32 -1.0 1,055,856 - Dsui_1023 0.33 -1.8 1,055,883 - Dsui_1023 0.37 -0.4 1,055,912 + Dsui_1023 0.42 -2.0 1,055,936 + Dsui_1023 0.45 +0.6 1,055,941 + Dsui_1023 0.46 -1.4 1,055,973 + Dsui_1023 0.51 -1.0 1,056,004 - Dsui_1023 0.55 -1.7 1,056,073 + Dsui_1023 0.65 -1.0 1,056,124 + Dsui_1023 0.73 +0.6 1,056,129 + +0.6 1,056,139 + Dsui_1023 0.75 -1.0 1,056,170 + Dsui_1023 0.79 -3.1 1,056,188 - Dsui_1023 0.82 -1.5 1,056,261 - -1.7 1,056,283 + -1.0 1,056,283 - -1.6 1,056,291 - -1.0 1,056,314 + -0.4 1,056,348 - -0.5
Or see this region's nucleotide sequence