Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0956 and Dsui_0957 are separated by 132 nucleotides Dsui_0957 and Dsui_0958 are separated by 64 nucleotides Dsui_0958 and Dsui_0959 are separated by 212 nucleotides Dsui_0959 and Dsui_0960 are separated by 9 nucleotides
Dsui_0956: Dsui_0956 - nitrogenase molybdenum-iron protein alpha chain, at 981,731 to 983,173
_0956
Dsui_0957: Dsui_0957 - nitrogenase molybdenum-iron protein beta chain, at 983,306 to 984,826
_0957
Dsui_0958: Dsui_0958 - ferredoxin, at 984,891 to 985,238
_0958
Dsui_0959: Dsui_0959 - hypothetical protein, at 985,451 to 985,690
_0959
Dsui_0960: Dsui_0960 - putative permease, at 985,700 to 986,755
_0960
Position (kb)
983
984
985 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 982.351 kb on + strand, within Dsui_0956 at 982.599 kb on + strand, within Dsui_0956 at 982.613 kb on + strand, within Dsui_0956 at 982.623 kb on + strand, within Dsui_0956 at 982.896 kb on + strand, within Dsui_0956 at 982.904 kb on - strand, within Dsui_0956 at 983.099 kb on + strand at 983.159 kb on + strand at 983.177 kb on - strand at 983.205 kb on + strand at 983.231 kb on + strand at 983.239 kb on - strand at 983.273 kb on - strand at 983.530 kb on + strand, within Dsui_0957 at 983.555 kb on + strand, within Dsui_0957 at 983.574 kb on + strand, within Dsui_0957 at 983.596 kb on + strand, within Dsui_0957 at 983.740 kb on - strand, within Dsui_0957 at 983.815 kb on - strand, within Dsui_0957 at 983.846 kb on + strand, within Dsui_0957 at 983.902 kb on + strand, within Dsui_0957 at 984.026 kb on + strand, within Dsui_0957 at 984.044 kb on - strand, within Dsui_0957 at 984.178 kb on - strand, within Dsui_0957 at 984.188 kb on + strand, within Dsui_0957 at 984.369 kb on - strand, within Dsui_0957 at 984.395 kb on - strand at 984.416 kb on + strand, within Dsui_0957 at 984.446 kb on - strand, within Dsui_0957 at 984.531 kb on - strand at 984.576 kb on - strand, within Dsui_0957 at 984.579 kb on + strand at 984.731 kb on - strand at 984.738 kb on + strand at 984.738 kb on + strand at 984.857 kb on - strand at 984.913 kb on + strand at 984.931 kb on - strand, within Dsui_0958 at 984.967 kb on - strand, within Dsui_0958 at 985.068 kb on + strand, within Dsui_0958 at 985.073 kb on + strand, within Dsui_0958 at 985.327 kb on + strand at 985.487 kb on - strand, within Dsui_0959 at 985.739 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 982,351 + Dsui_0956 0.43 +0.5 982,599 + Dsui_0956 0.60 +0.5 982,613 + Dsui_0956 0.61 +0.5 982,623 + Dsui_0956 0.62 -0.5 982,896 + Dsui_0956 0.81 +0.5 982,904 - Dsui_0956 0.81 -0.5 983,099 + -0.5 983,159 + +0.5 983,177 - -1.5 983,205 + +0.5 983,231 + +0.5 983,239 - +0.5 983,273 - -1.1 983,530 + Dsui_0957 0.15 -0.5 983,555 + Dsui_0957 0.16 +0.5 983,574 + Dsui_0957 0.18 -0.5 983,596 + Dsui_0957 0.19 +0.5 983,740 - Dsui_0957 0.29 -0.5 983,815 - Dsui_0957 0.33 -0.5 983,846 + Dsui_0957 0.36 -0.5 983,902 + Dsui_0957 0.39 +0.5 984,026 + Dsui_0957 0.47 -0.5 984,044 - Dsui_0957 0.49 +0.5 984,178 - Dsui_0957 0.57 -2.5 984,188 + Dsui_0957 0.58 +0.5 984,369 - Dsui_0957 0.70 -1.1 984,395 - -0.5 984,416 + Dsui_0957 0.73 -1.1 984,446 - Dsui_0957 0.75 -2.3 984,531 - -0.5 984,576 - Dsui_0957 0.83 -0.7 984,579 + +0.5 984,731 - +0.5 984,738 + +0.5 984,738 + -1.8 984,857 - -3.1 984,913 + +0.5 984,931 - Dsui_0958 0.11 -1.8 984,967 - Dsui_0958 0.22 -1.8 985,068 + Dsui_0958 0.51 -1.1 985,073 + Dsui_0958 0.52 -1.5 985,327 + -0.5 985,487 - Dsui_0959 0.15 +0.5 985,739 + -1.5
Or see this region's nucleotide sequence