Strain Fitness in Dechlorosoma suillum PS around Dsui_0830

Experiment: ALP with Cisplatin 0.0009 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0829 and Dsui_0830 are separated by 72 nucleotidesDsui_0830 and Dsui_0831 are separated by 229 nucleotides Dsui_0829: Dsui_0829 - DNA gyrase, B subunit, at 842,779 to 845,271 _0829 Dsui_0830: Dsui_0830 - DNA polymerase III, beta subunit, at 845,344 to 846,450 _0830 Dsui_0831: Dsui_0831 - chromosomal replication initiator protein DnaA, at 846,680 to 848,101 _0831 Position (kb) 845 846 847Strain fitness (log2 ratio) -2 -1 0 1at 845.277 kb on - strandat 845.318 kb on + strandat 845.318 kb on + strandat 845.326 kb on - strandat 845.326 kb on - strandat 845.326 kb on - strandat 846.488 kb on - strandat 846.488 kb on - strandat 846.523 kb on + strandat 846.526 kb on - strandat 846.531 kb on - strandat 846.531 kb on - strandat 846.531 kb on - strandat 846.531 kb on - strandat 846.531 kb on - strandat 846.541 kb on - strandat 846.546 kb on + strandat 846.554 kb on - strandat 846.554 kb on - strandat 846.554 kb on - strandat 846.604 kb on - strandat 846.604 kb on - strandat 846.609 kb on - strandat 846.663 kb on + strandat 846.669 kb on - strandat 846.669 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml
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845,277 - +0.6
845,318 + -2.1
845,318 + +0.5
845,326 - -0.0
845,326 - +0.1
845,326 - -0.0
846,488 - -0.1
846,488 - +0.6
846,523 + +0.5
846,526 - +0.0
846,531 - +0.5
846,531 - +0.0
846,531 - -0.1
846,531 - -0.0
846,531 - -0.5
846,541 - +0.9
846,546 + -1.1
846,554 - +0.3
846,554 - +0.2
846,554 - +0.6
846,604 - +0.9
846,604 - -0.1
846,609 - +0.3
846,663 + -1.5
846,669 - -0.2
846,669 - +0.8

Or see this region's nucleotide sequence