Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0760 and Dsui_0761 are separated by 99 nucleotides Dsui_0761 and Dsui_0762 are separated by 7 nucleotides Dsui_0762 and Dsui_0763 are separated by 231 nucleotides
Dsui_0760: Dsui_0760 - diguanylate cyclase (GGDEF) domain-containing protein, at 760,145 to 762,571
_0760
Dsui_0761: Dsui_0761 - phosphoserine phosphatase/homoserine phosphotransferase, at 762,671 to 763,279
_0761
Dsui_0762: Dsui_0762 - formyltetrahydrofolate deformylase, at 763,287 to 764,147
_0762
Dsui_0763: Dsui_0763 - ammonium transporter, at 764,379 to 765,779
_0763
Position (kb)
763
764
765 Strain fitness (log2 ratio)
-2
-1
0
1 at 762.307 kb on + strand at 762.473 kb on - strand at 762.507 kb on - strand at 762.528 kb on + strand at 762.608 kb on + strand at 762.615 kb on + strand at 764.273 kb on + strand at 764.290 kb on + strand at 764.342 kb on + strand at 764.415 kb on + strand at 764.415 kb on + strand at 764.527 kb on + strand at 764.535 kb on - strand at 764.535 kb on - strand at 764.592 kb on + strand, within Dsui_0763 at 764.714 kb on + strand, within Dsui_0763 at 764.721 kb on - strand, within Dsui_0763 at 764.729 kb on + strand, within Dsui_0763 at 764.755 kb on - strand, within Dsui_0763 at 764.845 kb on + strand, within Dsui_0763 at 764.845 kb on + strand, within Dsui_0763 at 764.845 kb on + strand, within Dsui_0763 at 764.853 kb on - strand, within Dsui_0763 at 764.980 kb on - strand, within Dsui_0763 at 764.985 kb on - strand, within Dsui_0763 at 764.987 kb on + strand, within Dsui_0763 at 765.014 kb on + strand, within Dsui_0763 at 765.016 kb on - strand, within Dsui_0763 at 765.016 kb on - strand, within Dsui_0763 at 765.052 kb on + strand at 765.092 kb on - strand, within Dsui_0763 at 765.126 kb on + strand, within Dsui_0763
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 762,307 + +0.5 762,473 - +0.5 762,507 - +0.5 762,528 + -0.2 762,608 + +0.5 762,615 + -2.1 764,273 + -0.5 764,290 + +0.5 764,342 + +0.5 764,415 + -1.9 764,415 + -1.5 764,527 + +0.5 764,535 - +0.5 764,535 - +0.5 764,592 + Dsui_0763 0.15 +0.5 764,714 + Dsui_0763 0.24 -0.5 764,721 - Dsui_0763 0.24 -0.5 764,729 + Dsui_0763 0.25 -0.5 764,755 - Dsui_0763 0.27 -2.5 764,845 + Dsui_0763 0.33 -0.1 764,845 + Dsui_0763 0.33 -1.5 764,845 + Dsui_0763 0.33 -0.5 764,853 - Dsui_0763 0.34 -1.1 764,980 - Dsui_0763 0.43 -1.5 764,985 - Dsui_0763 0.43 -0.5 764,987 + Dsui_0763 0.43 -1.1 765,014 + Dsui_0763 0.45 -1.9 765,016 - Dsui_0763 0.45 +0.5 765,016 - Dsui_0763 0.45 -1.1 765,052 + +0.5 765,092 - Dsui_0763 0.51 -1.9 765,126 + Dsui_0763 0.53 -0.5
Or see this region's nucleotide sequence