Strain Fitness in Dechlorosoma suillum PS around Dsui_0697

Experiment: ALP with Cisplatin 0.0009 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0696 and Dsui_0697 are separated by 80 nucleotidesDsui_0697 and Dsui_0698 are separated by 21 nucleotidesDsui_0698 and Dsui_0699 are separated by 16 nucleotides Dsui_0696: Dsui_0696 - family 3 adenylate cyclase, at 691,562 to 692,464 _0696 Dsui_0697: Dsui_0697 - protein kinase family protein, at 692,545 to 694,881 _0697 Dsui_0698: Dsui_0698 - hypothetical protein, at 694,903 to 695,718 _0698 Dsui_0699: Dsui_0699 - hypothetical protein, at 695,735 to 696,406 _0699 Position (kb) 692 693 694 695Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 691.559 kb on + strandat 691.564 kb on + strandat 691.572 kb on - strandat 691.575 kb on + strandat 691.595 kb on - strandat 691.633 kb on + strandat 691.707 kb on - strand, within Dsui_0696at 691.778 kb on - strand, within Dsui_0696at 691.810 kb on - strand, within Dsui_0696at 691.933 kb on + strand, within Dsui_0696at 691.936 kb on - strand, within Dsui_0696at 691.941 kb on - strand, within Dsui_0696at 692.032 kb on + strand, within Dsui_0696at 692.040 kb on - strand, within Dsui_0696at 692.084 kb on + strand, within Dsui_0696at 692.271 kb on - strand, within Dsui_0696at 692.430 kb on + strandat 692.496 kb on + strandat 692.504 kb on - strandat 692.529 kb on + strandat 692.529 kb on + strandat 692.529 kb on + strandat 692.529 kb on + strandat 692.529 kb on + strandat 692.529 kb on + strandat 692.537 kb on - strandat 692.537 kb on - strandat 692.537 kb on - strandat 692.537 kb on - strandat 692.609 kb on + strandat 692.685 kb on - strandat 692.741 kb on - strandat 692.776 kb on - strandat 692.780 kb on - strand, within Dsui_0697at 692.857 kb on - strand, within Dsui_0697at 693.004 kb on + strand, within Dsui_0697at 693.056 kb on - strand, within Dsui_0697at 693.056 kb on - strand, within Dsui_0697at 693.074 kb on + strand, within Dsui_0697at 693.087 kb on - strand, within Dsui_0697at 693.101 kb on - strand, within Dsui_0697at 693.152 kb on - strand, within Dsui_0697at 693.247 kb on + strand, within Dsui_0697at 693.311 kb on + strand, within Dsui_0697at 693.385 kb on + strand, within Dsui_0697at 693.388 kb on - strand, within Dsui_0697at 693.400 kb on + strand, within Dsui_0697at 693.426 kb on + strand, within Dsui_0697at 693.634 kb on - strand, within Dsui_0697at 693.681 kb on - strand, within Dsui_0697at 693.725 kb on - strand, within Dsui_0697at 693.777 kb on + strand, within Dsui_0697at 693.830 kb on + strandat 694.012 kb on - strand, within Dsui_0697at 694.204 kb on + strand, within Dsui_0697at 694.218 kb on + strand, within Dsui_0697at 694.249 kb on - strand, within Dsui_0697at 694.256 kb on - strand, within Dsui_0697at 694.284 kb on - strand, within Dsui_0697at 694.286 kb on + strandat 694.296 kb on + strand, within Dsui_0697at 694.322 kb on + strand, within Dsui_0697at 694.328 kb on - strand, within Dsui_0697at 694.332 kb on + strand, within Dsui_0697at 694.351 kb on - strand, within Dsui_0697at 694.370 kb on - strand, within Dsui_0697at 694.391 kb on - strand, within Dsui_0697at 694.421 kb on + strand, within Dsui_0697at 694.429 kb on - strand, within Dsui_0697at 694.501 kb on + strand, within Dsui_0697at 694.593 kb on - strand, within Dsui_0697at 694.620 kb on - strand, within Dsui_0697at 694.625 kb on + strand, within Dsui_0697at 694.638 kb on - strand, within Dsui_0697at 694.701 kb on + strandat 694.727 kb on - strandat 694.757 kb on + strandat 694.757 kb on + strandat 694.765 kb on - strandat 694.796 kb on - strandat 694.850 kb on - strandat 694.850 kb on - strandat 694.953 kb on + strandat 694.956 kb on - strandat 694.956 kb on - strandat 694.970 kb on - strandat 695.054 kb on + strand, within Dsui_0698at 695.062 kb on - strand, within Dsui_0698at 695.102 kb on + strand, within Dsui_0698at 695.115 kb on - strand, within Dsui_0698at 695.120 kb on - strand, within Dsui_0698at 695.173 kb on - strand, within Dsui_0698at 695.178 kb on - strand, within Dsui_0698at 695.273 kb on + strand, within Dsui_0698at 695.273 kb on + strand, within Dsui_0698at 695.281 kb on - strand, within Dsui_0698at 695.309 kb on + strand, within Dsui_0698at 695.353 kb on - strand, within Dsui_0698at 695.353 kb on - strand, within Dsui_0698at 695.363 kb on + strand, within Dsui_0698at 695.371 kb on - strand, within Dsui_0698at 695.439 kb on + strand, within Dsui_0698at 695.535 kb on - strand, within Dsui_0698at 695.552 kb on + strand, within Dsui_0698at 695.552 kb on + strand, within Dsui_0698at 695.583 kb on - strand, within Dsui_0698at 695.584 kb on - strand, within Dsui_0698at 695.615 kb on - strand, within Dsui_0698at 695.615 kb on - strand, within Dsui_0698at 695.615 kb on - strand, within Dsui_0698at 695.615 kb on - strand, within Dsui_0698at 695.632 kb on + strand, within Dsui_0698at 695.652 kb on - strandat 695.659 kb on + strandat 695.686 kb on + strandat 695.686 kb on + strandat 695.733 kb on - strandat 695.765 kb on - strandat 695.786 kb on - strandat 695.793 kb on + strandat 695.793 kb on + strandat 695.805 kb on + strand, within Dsui_0699at 695.815 kb on + strand, within Dsui_0699at 695.816 kb on + strand, within Dsui_0699at 695.861 kb on - strand, within Dsui_0699at 695.861 kb on - strand, within Dsui_0699at 695.864 kb on + strand, within Dsui_0699

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml
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691,559 + -0.8
691,564 + +0.8
691,572 - +0.4
691,575 + +0.5
691,595 - +0.4
691,633 + -0.2
691,707 - Dsui_0696 0.16 -1.2
691,778 - Dsui_0696 0.24 +0.4
691,810 - Dsui_0696 0.27 -1.2
691,933 + Dsui_0696 0.41 +0.4
691,936 - Dsui_0696 0.41 +0.4
691,941 - Dsui_0696 0.42 +0.4
692,032 + Dsui_0696 0.52 +0.4
692,040 - Dsui_0696 0.53 -1.6
692,084 + Dsui_0696 0.58 +0.4
692,271 - Dsui_0696 0.79 +2.6
692,430 + -0.4
692,496 + -0.0
692,504 - -1.0
692,529 + -1.2
692,529 + -1.6
692,529 + +0.4
692,529 + -0.3
692,529 + -0.6
692,529 + +0.4
692,537 - -0.4
692,537 - +0.3
692,537 - +0.8
692,537 - +0.9
692,609 + -2.4
692,685 - -0.7
692,741 - -0.4
692,776 - -0.6
692,780 - Dsui_0697 0.10 +0.3
692,857 - Dsui_0697 0.13 -0.9
693,004 + Dsui_0697 0.20 -2.2
693,056 - Dsui_0697 0.22 -0.0
693,056 - Dsui_0697 0.22 -0.2
693,074 + Dsui_0697 0.23 -1.6
693,087 - Dsui_0697 0.23 -1.0
693,101 - Dsui_0697 0.24 -0.9
693,152 - Dsui_0697 0.26 -0.5
693,247 + Dsui_0697 0.30 -2.4
693,311 + Dsui_0697 0.33 +0.4
693,385 + Dsui_0697 0.36 -1.2
693,388 - Dsui_0697 0.36 -0.3
693,400 + Dsui_0697 0.37 +0.4
693,426 + Dsui_0697 0.38 -1.9
693,634 - Dsui_0697 0.47 +0.3
693,681 - Dsui_0697 0.49 +0.6
693,725 - Dsui_0697 0.50 -0.0
693,777 + Dsui_0697 0.53 -1.6
693,830 + +0.4
694,012 - Dsui_0697 0.63 +0.0
694,204 + Dsui_0697 0.71 -1.6
694,218 + Dsui_0697 0.72 +0.4
694,249 - Dsui_0697 0.73 -0.7
694,256 - Dsui_0697 0.73 -0.5
694,284 - Dsui_0697 0.74 -0.9
694,286 + +0.4
694,296 + Dsui_0697 0.75 -1.6
694,322 + Dsui_0697 0.76 -1.9
694,328 - Dsui_0697 0.76 -1.5
694,332 + Dsui_0697 0.76 -0.6
694,351 - Dsui_0697 0.77 -0.0
694,370 - Dsui_0697 0.78 -1.0
694,391 - Dsui_0697 0.79 -0.7
694,421 + Dsui_0697 0.80 -0.6
694,429 - Dsui_0697 0.81 -0.4
694,501 + Dsui_0697 0.84 -1.2
694,593 - Dsui_0697 0.88 -0.8
694,620 - Dsui_0697 0.89 +0.4
694,625 + Dsui_0697 0.89 -1.6
694,638 - Dsui_0697 0.90 +0.4
694,701 + -1.2
694,727 - -0.2
694,757 + -1.9
694,757 + -1.2
694,765 - -0.7
694,796 - -0.1
694,850 - -0.7
694,850 - -0.1
694,953 + +0.4
694,956 - -0.3
694,956 - +0.4
694,970 - -0.1
695,054 + Dsui_0698 0.19 +0.4
695,062 - Dsui_0698 0.19 -0.4
695,102 + Dsui_0698 0.24 +0.4
695,115 - Dsui_0698 0.26 -0.4
695,120 - Dsui_0698 0.27 +0.4
695,173 - Dsui_0698 0.33 -0.2
695,178 - Dsui_0698 0.34 -0.5
695,273 + Dsui_0698 0.45 +0.4
695,273 + Dsui_0698 0.45 -0.6
695,281 - Dsui_0698 0.46 -0.3
695,309 + Dsui_0698 0.50 -1.9
695,353 - Dsui_0698 0.55 -1.0
695,353 - Dsui_0698 0.55 +0.3
695,363 + Dsui_0698 0.56 -2.9
695,371 - Dsui_0698 0.57 -0.2
695,439 + Dsui_0698 0.66 -0.8
695,535 - Dsui_0698 0.77 -0.1
695,552 + Dsui_0698 0.80 -2.2
695,552 + Dsui_0698 0.80 -1.9
695,583 - Dsui_0698 0.83 +0.5
695,584 - Dsui_0698 0.83 -0.4
695,615 - Dsui_0698 0.87 -0.3
695,615 - Dsui_0698 0.87 -0.5
695,615 - Dsui_0698 0.87 -0.6
695,615 - Dsui_0698 0.87 -0.5
695,632 + Dsui_0698 0.89 +0.4
695,652 - -0.3
695,659 + -2.2
695,686 + +2.0
695,686 + -2.1
695,733 - -0.3
695,765 - +0.4
695,786 - +0.2
695,793 + -0.6
695,793 + -1.6
695,805 + Dsui_0699 0.10 -0.6
695,815 + Dsui_0699 0.12 -1.9
695,816 + Dsui_0699 0.12 +0.4
695,861 - Dsui_0699 0.19 -0.1
695,861 - Dsui_0699 0.19 -1.9
695,864 + Dsui_0699 0.19 +0.4

Or see this region's nucleotide sequence