Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0674 and Dsui_0675 are separated by 11 nucleotides Dsui_0675 and Dsui_0676 are separated by 77 nucleotides Dsui_0676 and Dsui_0677 overlap by 4 nucleotides Dsui_0677 and Dsui_0678 are separated by 129 nucleotides
Dsui_0674: Dsui_0674 - cell division protein, at 673,639 to 674,295
_0674
Dsui_0675: Dsui_0675 - putative dithiol-disulfide isomerase involved in polyketide biosynthesis, at 674,307 to 674,966
_0675
Dsui_0676: Dsui_0676 - short-chain dehydrogenase of unknown substrate specificity, at 675,044 to 675,817
_0676
Dsui_0677: Dsui_0677 - hypothetical protein, at 675,814 to 676,635
_0677
Dsui_0678: Dsui_0678 - hypothetical protein, at 676,765 to 677,121
_0678
Position (kb)
675
676 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 674.250 kb on + strand at 674.250 kb on + strand at 674.312 kb on - strand at 674.336 kb on - strand at 674.400 kb on + strand, within Dsui_0675 at 674.469 kb on - strand at 674.516 kb on - strand at 674.595 kb on + strand, within Dsui_0675 at 674.708 kb on + strand, within Dsui_0675 at 674.878 kb on - strand at 674.884 kb on - strand at 674.906 kb on + strand at 675.059 kb on - strand at 675.060 kb on - strand at 675.067 kb on - strand at 675.067 kb on - strand at 675.137 kb on - strand at 675.559 kb on - strand, within Dsui_0676 at 675.618 kb on + strand, within Dsui_0676 at 675.627 kb on - strand, within Dsui_0676 at 675.760 kb on + strand at 675.780 kb on + strand at 675.784 kb on + strand at 675.788 kb on - strand at 676.016 kb on + strand, within Dsui_0677 at 676.258 kb on + strand at 676.280 kb on + strand, within Dsui_0677 at 676.280 kb on - strand, within Dsui_0677 at 676.302 kb on - strand, within Dsui_0677 at 676.620 kb on + strand at 676.645 kb on - strand at 676.715 kb on + strand at 676.723 kb on - strand at 676.723 kb on - strand at 676.772 kb on + strand at 676.772 kb on + strand at 676.772 kb on + strand at 676.780 kb on - strand at 676.780 kb on - strand at 676.780 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 674,250 + -1.6 674,250 + -1.8 674,312 - -1.9 674,336 - +0.4 674,400 + Dsui_0675 0.14 -3.5 674,469 - +0.4 674,516 - -0.6 674,595 + Dsui_0675 0.44 -1.5 674,708 + Dsui_0675 0.61 -2.3 674,878 - +0.4 674,884 - -0.6 674,906 + -1.3 675,059 - -1.0 675,060 - -0.6 675,067 - -1.4 675,067 - -0.6 675,137 - +0.4 675,559 - Dsui_0676 0.67 -1.2 675,618 + Dsui_0676 0.74 +0.6 675,627 - Dsui_0676 0.75 -1.6 675,760 + -0.4 675,780 + -0.2 675,784 + -1.6 675,788 - +0.3 676,016 + Dsui_0677 0.25 -2.8 676,258 + -0.6 676,280 + Dsui_0677 0.57 +0.4 676,280 - Dsui_0677 0.57 -0.1 676,302 - Dsui_0677 0.59 -0.8 676,620 + -1.6 676,645 - -1.7 676,715 + -1.2 676,723 - -1.2 676,723 - -1.2 676,772 + -1.5 676,772 + -0.3 676,772 + -0.5 676,780 - -1.9 676,780 - -0.6 676,780 - +0.4
Or see this region's nucleotide sequence