Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0583 and Dsui_0584 overlap by 4 nucleotides Dsui_0584 and Dsui_0585 are separated by 7 nucleotides Dsui_0585 and Dsui_0586 are separated by 164 nucleotides
Dsui_0583: Dsui_0583 - ABC-type Mn2+/Zn2+ transport system, permease component, at 581,094 to 581,912
_0583
Dsui_0584: Dsui_0584 - ATPase component of Mn/Zn ABC-type transporter, at 581,909 to 582,502
_0584
Dsui_0585: Dsui_0585 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 582,510 to 583,403
_0585
Dsui_0586: Dsui_0586 - hypothetical protein, at 583,568 to 585,022
_0586
Position (kb) 582
583
584 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 581.555 kb on - strand, within Dsui_0583 at 581.609 kb on + strand at 581.744 kb on - strand, within Dsui_0583 at 581.827 kb on - strand, within Dsui_0583 at 581.921 kb on - strand at 581.984 kb on - strand at 582.372 kb on + strand, within Dsui_0584 at 582.406 kb on + strand, within Dsui_0584 at 582.451 kb on - strand at 582.481 kb on - strand at 582.485 kb on + strand at 582.516 kb on - strand at 582.531 kb on - strand at 582.570 kb on + strand at 582.688 kb on + strand at 582.781 kb on - strand at 582.835 kb on + strand, within Dsui_0585 at 582.835 kb on + strand, within Dsui_0585 at 582.858 kb on - strand, within Dsui_0585 at 583.021 kb on + strand, within Dsui_0585 at 583.044 kb on + strand, within Dsui_0585 at 583.070 kb on + strand at 583.158 kb on + strand, within Dsui_0585 at 583.166 kb on - strand, within Dsui_0585 at 583.225 kb on + strand at 583.276 kb on + strand at 583.305 kb on + strand, within Dsui_0585 at 583.313 kb on - strand, within Dsui_0585 at 583.318 kb on + strand at 583.364 kb on + strand at 583.374 kb on - strand at 583.437 kb on - strand at 583.597 kb on + strand at 583.599 kb on + strand at 583.607 kb on - strand at 583.649 kb on - strand at 583.695 kb on - strand at 583.734 kb on - strand, within Dsui_0586 at 583.800 kb on - strand, within Dsui_0586 at 583.807 kb on - strand, within Dsui_0586 at 584.094 kb on - strand, within Dsui_0586 at 584.237 kb on + strand, within Dsui_0586 at 584.311 kb on + strand at 584.365 kb on - strand, within Dsui_0586
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 581,555 - Dsui_0583 0.56 +0.8 581,609 + -0.6 581,744 - Dsui_0583 0.79 -0.2 581,827 - Dsui_0583 0.89 +0.4 581,921 - -1.2 581,984 - +0.4 582,372 + Dsui_0584 0.78 -0.6 582,406 + Dsui_0584 0.84 -0.6 582,451 - -0.5 582,481 - -2.0 582,485 + +0.4 582,516 - -0.3 582,531 - -0.4 582,570 + +0.4 582,688 + +0.4 582,781 - +0.4 582,835 + Dsui_0585 0.36 -1.6 582,835 + Dsui_0585 0.36 +0.4 582,858 - Dsui_0585 0.39 +0.4 583,021 + Dsui_0585 0.57 -0.6 583,044 + Dsui_0585 0.60 +0.4 583,070 + +0.4 583,158 + Dsui_0585 0.72 +0.4 583,166 - Dsui_0585 0.73 -1.6 583,225 + +0.4 583,276 + +0.4 583,305 + Dsui_0585 0.89 -2.9 583,313 - Dsui_0585 0.90 -0.6 583,318 + -0.6 583,364 + +0.4 583,374 - +0.4 583,437 - -1.9 583,597 + -2.2 583,599 + -1.9 583,607 - -1.2 583,649 - -0.6 583,695 - +0.4 583,734 - Dsui_0586 0.11 -1.9 583,800 - Dsui_0586 0.16 -1.2 583,807 - Dsui_0586 0.16 -1.2 584,094 - Dsui_0586 0.36 -0.6 584,237 + Dsui_0586 0.46 -1.6 584,311 + +0.4 584,365 - Dsui_0586 0.55 +0.4
Or see this region's nucleotide sequence