Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0446 and Dsui_0447 are separated by 7 nucleotides Dsui_0447 and Dsui_0448 are separated by 18 nucleotides Dsui_0448 and Dsui_0449 are separated by 49 nucleotides
Dsui_0446: Dsui_0446 - exoribonuclease R, at 452,675 to 454,588
_0446
Dsui_0447: Dsui_0447 - putative esterase, at 454,596 to 455,159
_0447
Dsui_0448: Dsui_0448 - hypothetical protein, at 455,178 to 456,083
_0448
Dsui_0449: Dsui_0449 - undecaprenyl-diphosphatase UppP, at 456,133 to 456,957
_0449
Position (kb) 454
455
456 Strain fitness (log2 ratio) -2
-1
0
1 at 454.685 kb on + strand, within Dsui_0447 at 454.695 kb on - strand, within Dsui_0447 at 454.698 kb on + strand, within Dsui_0447 at 454.725 kb on - strand, within Dsui_0447 at 454.778 kb on + strand at 454.894 kb on + strand, within Dsui_0447 at 454.963 kb on + strand, within Dsui_0447 at 454.974 kb on + strand, within Dsui_0447 at 454.974 kb on + strand, within Dsui_0447 at 455.008 kb on + strand, within Dsui_0447 at 455.045 kb on - strand, within Dsui_0447 at 455.088 kb on - strand, within Dsui_0447 at 455.161 kb on + strand at 455.161 kb on + strand at 455.169 kb on - strand at 455.283 kb on - strand, within Dsui_0448 at 455.432 kb on + strand at 455.528 kb on - strand, within Dsui_0448 at 455.620 kb on + strand, within Dsui_0448 at 455.628 kb on - strand, within Dsui_0448 at 455.628 kb on - strand, within Dsui_0448 at 455.644 kb on + strand, within Dsui_0448 at 455.747 kb on - strand, within Dsui_0448 at 455.776 kb on - strand, within Dsui_0448 at 455.905 kb on + strand, within Dsui_0448 at 455.906 kb on - strand, within Dsui_0448 at 455.918 kb on - strand, within Dsui_0448 at 455.973 kb on - strand, within Dsui_0448 at 455.973 kb on - strand, within Dsui_0448
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 454,685 + Dsui_0447 0.16 -1.7 454,695 - Dsui_0447 0.18 +0.0 454,698 + Dsui_0447 0.18 -2.5 454,725 - Dsui_0447 0.23 -0.7 454,778 + -0.7 454,894 + Dsui_0447 0.53 -0.7 454,963 + Dsui_0447 0.65 -1.7 454,974 + Dsui_0447 0.67 -0.7 454,974 + Dsui_0447 0.67 -2.7 455,008 + Dsui_0447 0.73 -1.7 455,045 - Dsui_0447 0.80 -0.5 455,088 - Dsui_0447 0.87 -0.3 455,161 + -0.7 455,161 + -2.5 455,169 - -0.3 455,283 - Dsui_0448 0.12 +0.2 455,432 + +0.3 455,528 - Dsui_0448 0.39 +0.1 455,620 + Dsui_0448 0.49 -2.7 455,628 - Dsui_0448 0.50 -0.2 455,628 - Dsui_0448 0.50 -0.4 455,644 + Dsui_0448 0.51 -2.0 455,747 - Dsui_0448 0.63 +0.8 455,776 - Dsui_0448 0.66 +0.2 455,905 + Dsui_0448 0.80 -1.3 455,906 - Dsui_0448 0.80 +0.3 455,918 - Dsui_0448 0.82 +0.3 455,973 - Dsui_0448 0.88 -0.2 455,973 - Dsui_0448 0.88 -0.5
Or see this region's nucleotide sequence