Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0420 and Dsui_0421 are separated by 58 nucleotides Dsui_0421 and Dsui_0422 are separated by 330 nucleotides
Dsui_0420: Dsui_0420 - transcriptional regulator with HTH domain and aminotransferase domain, at 421,215 to 422,624
_0420
Dsui_0421: Dsui_0421 - carbonic anhydrase, at 422,683 to 424,119
_0421
Dsui_0422: Dsui_0422 - thiamine biosynthesis protein ThiC, at 424,450 to 426,366
_0422
Position (kb) 422
423
424
425 Strain fitness (log2 ratio) -2
-1
0
1 at 421.729 kb on - strand at 421.777 kb on + strand, within Dsui_0420 at 421.851 kb on - strand, within Dsui_0420 at 421.876 kb on + strand, within Dsui_0420 at 421.958 kb on - strand at 421.958 kb on - strand, within Dsui_0420 at 422.117 kb on + strand, within Dsui_0420 at 422.122 kb on + strand, within Dsui_0420 at 422.130 kb on - strand, within Dsui_0420 at 422.182 kb on + strand, within Dsui_0420 at 422.234 kb on - strand, within Dsui_0420 at 422.615 kb on - strand at 422.616 kb on - strand at 422.616 kb on - strand at 422.779 kb on + strand at 422.963 kb on - strand, within Dsui_0421 at 422.964 kb on - strand at 423.122 kb on - strand, within Dsui_0421 at 423.331 kb on + strand at 423.369 kb on + strand, within Dsui_0421 at 423.378 kb on + strand, within Dsui_0421 at 423.379 kb on + strand, within Dsui_0421 at 423.463 kb on + strand at 423.625 kb on - strand, within Dsui_0421 at 423.647 kb on + strand, within Dsui_0421 at 423.769 kb on - strand, within Dsui_0421 at 423.857 kb on + strand, within Dsui_0421 at 423.897 kb on - strand, within Dsui_0421 at 423.935 kb on + strand, within Dsui_0421 at 423.985 kb on - strand at 424.115 kb on + strand at 424.115 kb on + strand at 424.123 kb on - strand at 424.140 kb on + strand at 424.140 kb on + strand at 424.151 kb on + strand at 424.151 kb on + strand at 424.159 kb on - strand at 424.159 kb on - strand at 424.159 kb on - strand at 424.181 kb on + strand at 424.192 kb on + strand at 424.242 kb on + strand at 424.242 kb on + strand at 424.250 kb on - strand at 424.369 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 421,729 - +0.4 421,777 + Dsui_0420 0.40 -0.8 421,851 - Dsui_0420 0.45 -2.0 421,876 + Dsui_0420 0.47 -0.5 421,958 - +0.4 421,958 - Dsui_0420 0.53 -1.2 422,117 + Dsui_0420 0.64 -1.0 422,122 + Dsui_0420 0.64 -0.8 422,130 - Dsui_0420 0.65 -1.2 422,182 + Dsui_0420 0.69 -0.2 422,234 - Dsui_0420 0.72 -0.6 422,615 - +0.4 422,616 - +0.4 422,616 - +0.4 422,779 + -1.6 422,963 - Dsui_0421 0.19 +0.4 422,964 - +0.4 423,122 - Dsui_0421 0.31 -1.2 423,331 + -1.2 423,369 + Dsui_0421 0.48 -2.5 423,378 + Dsui_0421 0.48 -1.2 423,379 + Dsui_0421 0.48 -1.6 423,463 + +0.4 423,625 - Dsui_0421 0.66 +0.9 423,647 + Dsui_0421 0.67 -0.6 423,769 - Dsui_0421 0.76 +0.4 423,857 + Dsui_0421 0.82 -1.2 423,897 - Dsui_0421 0.84 -0.6 423,935 + Dsui_0421 0.87 +0.4 423,985 - -0.6 424,115 + +0.4 424,115 + -1.2 424,123 - -2.0 424,140 + +0.4 424,140 + -1.6 424,151 + +0.4 424,151 + +0.4 424,159 - -0.6 424,159 - -1.2 424,159 - -1.2 424,181 + -1.2 424,192 + -1.2 424,242 + -0.6 424,242 + -0.9 424,250 - +0.4 424,369 + -1.5
Or see this region's nucleotide sequence