Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0311 and Dsui_0312 are separated by 14 nucleotides Dsui_0312 and Dsui_0313 are separated by 45 nucleotides Dsui_0313 and Dsui_0314 are separated by 210 nucleotides
Dsui_0311: Dsui_0311 - ATP-dependent DNA helicase RecG, at 313,136 to 315,211
_0311
Dsui_0312: Dsui_0312 - endoribonuclease L-PSP, putative, at 315,226 to 315,606
_0312
Dsui_0313: Dsui_0313 - putative transcriptional regulator, at 315,652 to 316,005
_0313
Dsui_0314: Dsui_0314 - cell division protein, at 316,216 to 317,061
_0314
Position (kb) 315
316
317 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 314.659 kb on + strand, within Dsui_0311 at 314.687 kb on + strand at 314.756 kb on + strand at 314.941 kb on - strand, within Dsui_0311 at 315.022 kb on + strand at 315.045 kb on + strand at 315.129 kb on - strand at 315.129 kb on - strand at 315.224 kb on - strand at 315.664 kb on + strand at 315.725 kb on - strand, within Dsui_0313 at 315.727 kb on - strand at 315.741 kb on + strand, within Dsui_0313 at 315.741 kb on + strand at 315.749 kb on - strand, within Dsui_0313 at 315.749 kb on - strand, within Dsui_0313 at 315.749 kb on - strand, within Dsui_0313 at 315.749 kb on - strand, within Dsui_0313 at 315.749 kb on - strand, within Dsui_0313 at 315.756 kb on - strand, within Dsui_0313 at 315.776 kb on + strand, within Dsui_0313 at 315.851 kb on - strand, within Dsui_0313 at 315.967 kb on + strand at 315.999 kb on + strand at 316.089 kb on - strand at 316.091 kb on + strand at 316.109 kb on + strand at 316.168 kb on - strand at 316.214 kb on - strand at 316.273 kb on - strand at 316.313 kb on + strand, within Dsui_0314 at 316.327 kb on - strand, within Dsui_0314 at 316.359 kb on + strand, within Dsui_0314 at 316.411 kb on + strand at 316.459 kb on - strand, within Dsui_0314 at 316.701 kb on + strand, within Dsui_0314 at 316.951 kb on - strand, within Dsui_0314 at 316.962 kb on - strand, within Dsui_0314 at 316.973 kb on - strand, within Dsui_0314
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 314,659 + Dsui_0311 0.73 -2.4 314,687 + +0.4 314,756 + +0.4 314,941 - Dsui_0311 0.87 -6.1 315,022 + +0.4 315,045 + -0.6 315,129 - -5.4 315,129 - -3.9 315,224 - -0.3 315,664 + +0.4 315,725 - Dsui_0313 0.21 -1.6 315,727 - -0.6 315,741 + Dsui_0313 0.25 -0.6 315,741 + +0.4 315,749 - Dsui_0313 0.27 -2.2 315,749 - Dsui_0313 0.27 -3.5 315,749 - Dsui_0313 0.27 +0.4 315,749 - Dsui_0313 0.27 -1.9 315,749 - Dsui_0313 0.27 -0.6 315,756 - Dsui_0313 0.29 -1.6 315,776 + Dsui_0313 0.35 -1.3 315,851 - Dsui_0313 0.56 +0.4 315,967 + +0.4 315,999 + -2.2 316,089 - -1.6 316,091 + +2.2 316,109 + -1.2 316,168 - -0.3 316,214 - -1.0 316,273 - +0.1 316,313 + Dsui_0314 0.11 -1.2 316,327 - Dsui_0314 0.13 +0.5 316,359 + Dsui_0314 0.17 -1.9 316,411 + +0.4 316,459 - Dsui_0314 0.29 -0.1 316,701 + Dsui_0314 0.57 -0.6 316,951 - Dsui_0314 0.87 +0.1 316,962 - Dsui_0314 0.88 -0.3 316,973 - Dsui_0314 0.89 -0.2
Or see this region's nucleotide sequence