Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0200 and Dsui_0201 are separated by 55 nucleotides Dsui_0201 and Dsui_0202 are separated by 3 nucleotides Dsui_0202 and Dsui_0203 are separated by 14 nucleotides Dsui_0203 and Dsui_0204 are separated by 1 nucleotides
Dsui_0200: Dsui_0200 - hypothetical protein, at 200,514 to 200,936
_0200
Dsui_0201: Dsui_0201 - hypothetical protein, at 200,992 to 201,759
_0201
Dsui_0202: Dsui_0202 - hypothetical protein, at 201,763 to 202,095
_0202
Dsui_0203: Dsui_0203 - hypothetical protein, at 202,110 to 202,382
_0203
Dsui_0204: Dsui_0204 - hypothetical protein, at 202,384 to 204,846
_0204
Position (kb)
201
202
203 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 200.905 kb on - strand at 200.949 kb on - strand at 200.952 kb on + strand at 200.952 kb on + strand at 200.960 kb on - strand at 200.970 kb on + strand at 200.978 kb on - strand at 200.998 kb on - strand at 201.056 kb on - strand at 201.185 kb on - strand, within Dsui_0201 at 201.195 kb on + strand, within Dsui_0201 at 201.231 kb on - strand, within Dsui_0201 at 201.299 kb on + strand, within Dsui_0201 at 201.322 kb on - strand, within Dsui_0201 at 201.367 kb on - strand, within Dsui_0201 at 201.427 kb on + strand, within Dsui_0201 at 201.510 kb on - strand, within Dsui_0201 at 201.757 kb on - strand at 201.850 kb on - strand, within Dsui_0202 at 201.881 kb on - strand, within Dsui_0202 at 201.881 kb on - strand at 202.083 kb on - strand at 202.122 kb on - strand at 202.137 kb on + strand at 202.156 kb on - strand, within Dsui_0203 at 202.183 kb on - strand, within Dsui_0203 at 202.380 kb on - strand at 202.412 kb on + strand at 202.413 kb on + strand at 202.559 kb on + strand at 202.567 kb on - strand at 202.567 kb on - strand at 202.569 kb on + strand at 202.654 kb on + strand, within Dsui_0204 at 202.659 kb on + strand, within Dsui_0204 at 202.962 kb on + strand, within Dsui_0204 at 202.963 kb on - strand, within Dsui_0204 at 202.963 kb on - strand, within Dsui_0204
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 200,905 - -0.7 200,949 - +2.6 200,952 + -0.7 200,952 + -0.7 200,960 - -2.3 200,970 + +0.3 200,978 - +0.3 200,998 - -0.7 201,056 - +0.3 201,185 - Dsui_0201 0.25 -1.3 201,195 + Dsui_0201 0.26 -2.0 201,231 - Dsui_0201 0.31 +0.3 201,299 + Dsui_0201 0.40 -1.3 201,322 - Dsui_0201 0.43 +0.3 201,367 - Dsui_0201 0.49 +0.3 201,427 + Dsui_0201 0.57 +0.3 201,510 - Dsui_0201 0.67 +0.3 201,757 - +0.3 201,850 - Dsui_0202 0.26 +0.3 201,881 - Dsui_0202 0.35 -1.3 201,881 - +0.3 202,083 - +0.3 202,122 - +0.3 202,137 + -0.7 202,156 - Dsui_0203 0.17 -1.7 202,183 - Dsui_0203 0.27 +0.3 202,380 - -0.7 202,412 + -0.7 202,413 + -0.7 202,559 + +0.3 202,567 - +0.3 202,567 - -0.7 202,569 + +0.3 202,654 + Dsui_0204 0.11 -0.7 202,659 + Dsui_0204 0.11 +0.3 202,962 + Dsui_0204 0.23 +0.3 202,963 - Dsui_0204 0.24 -1.3 202,963 - Dsui_0204 0.24 +0.3
Or see this region's nucleotide sequence