Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0112 and Dsui_0113 are separated by 21 nucleotides Dsui_0113 and Dsui_0114 are separated by 13 nucleotides Dsui_0114 and Dsui_0115 are separated by 203 nucleotides Dsui_0115 and Dsui_0116 are separated by 116 nucleotides
Dsui_0112: Dsui_0112 - serine/threonine protein kinase, at 110,720 to 112,012
_0112
Dsui_0113: Dsui_0113 - hypothetical protein, at 112,034 to 112,297
_0113
Dsui_0114: Dsui_0114 - ammonium transporter, at 112,311 to 113,750
_0114
Dsui_0115: Dsui_0115 - hypothetical protein, at 113,954 to 114,448
_0115
Dsui_0116: Dsui_0116 - alkylhydroperoxidase AhpD family core domain protein, at 114,565 to 114,924
_0116
Position (kb)
112
113
114 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 111.335 kb on - strand, within Dsui_0112 at 111.440 kb on - strand, within Dsui_0112 at 111.472 kb on + strand, within Dsui_0112 at 111.480 kb on - strand, within Dsui_0112 at 111.504 kb on - strand, within Dsui_0112 at 111.507 kb on + strand, within Dsui_0112 at 111.515 kb on - strand, within Dsui_0112 at 111.532 kb on + strand, within Dsui_0112 at 111.540 kb on - strand at 111.654 kb on - strand at 111.656 kb on + strand, within Dsui_0112 at 111.664 kb on - strand, within Dsui_0112 at 111.738 kb on - strand, within Dsui_0112 at 111.753 kb on + strand, within Dsui_0112 at 111.866 kb on + strand, within Dsui_0112 at 111.867 kb on + strand, within Dsui_0112 at 111.877 kb on + strand, within Dsui_0112 at 111.885 kb on - strand at 111.892 kb on + strand at 111.905 kb on + strand at 111.910 kb on + strand at 111.988 kb on - strand at 112.040 kb on - strand at 112.052 kb on - strand at 112.059 kb on + strand at 112.060 kb on - strand at 112.228 kb on + strand, within Dsui_0113 at 112.236 kb on - strand, within Dsui_0113 at 112.268 kb on - strand at 112.299 kb on + strand at 112.300 kb on - strand at 112.300 kb on - strand at 112.300 kb on - strand at 112.385 kb on + strand at 112.389 kb on - strand at 112.431 kb on + strand at 112.434 kb on - strand at 112.562 kb on + strand, within Dsui_0114 at 112.562 kb on + strand, within Dsui_0114 at 112.570 kb on - strand, within Dsui_0114 at 112.601 kb on - strand at 112.613 kb on + strand, within Dsui_0114 at 112.620 kb on + strand, within Dsui_0114 at 112.623 kb on - strand, within Dsui_0114 at 112.740 kb on + strand at 112.748 kb on - strand, within Dsui_0114 at 112.763 kb on - strand, within Dsui_0114 at 112.886 kb on - strand at 112.913 kb on - strand, within Dsui_0114 at 112.918 kb on - strand, within Dsui_0114 at 112.928 kb on - strand, within Dsui_0114 at 112.935 kb on + strand, within Dsui_0114 at 112.941 kb on + strand at 112.949 kb on - strand, within Dsui_0114 at 112.966 kb on + strand at 112.990 kb on + strand, within Dsui_0114 at 112.990 kb on + strand at 112.990 kb on + strand, within Dsui_0114 at 113.030 kb on + strand, within Dsui_0114 at 113.115 kb on + strand at 113.146 kb on + strand at 113.173 kb on - strand, within Dsui_0114 at 113.187 kb on + strand, within Dsui_0114 at 113.255 kb on + strand at 113.287 kb on - strand, within Dsui_0114 at 113.321 kb on + strand, within Dsui_0114 at 113.336 kb on - strand, within Dsui_0114 at 113.383 kb on + strand at 113.427 kb on - strand, within Dsui_0114 at 113.437 kb on - strand, within Dsui_0114 at 113.437 kb on - strand, within Dsui_0114 at 113.443 kb on - strand, within Dsui_0114 at 113.446 kb on + strand, within Dsui_0114 at 113.457 kb on + strand, within Dsui_0114 at 113.462 kb on + strand, within Dsui_0114 at 113.497 kb on - strand, within Dsui_0114 at 113.533 kb on + strand at 113.543 kb on + strand, within Dsui_0114 at 113.636 kb on + strand at 113.644 kb on - strand at 113.685 kb on - strand at 113.726 kb on - strand at 113.751 kb on - strand at 113.795 kb on - strand at 113.805 kb on - strand at 113.896 kb on + strand at 113.896 kb on + strand at 113.904 kb on - strand at 113.904 kb on - strand at 113.985 kb on - strand at 113.999 kb on + strand at 114.006 kb on - strand, within Dsui_0115 at 114.030 kb on - strand, within Dsui_0115 at 114.051 kb on - strand, within Dsui_0115 at 114.062 kb on + strand, within Dsui_0115 at 114.121 kb on + strand, within Dsui_0115 at 114.185 kb on - strand, within Dsui_0115 at 114.206 kb on - strand, within Dsui_0115 at 114.285 kb on + strand, within Dsui_0115 at 114.293 kb on - strand, within Dsui_0115 at 114.331 kb on - strand, within Dsui_0115 at 114.421 kb on + strand at 114.444 kb on - strand at 114.496 kb on - strand at 114.499 kb on + strand at 114.514 kb on + strand at 114.562 kb on + strand at 114.615 kb on - strand at 114.621 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 111,335 - Dsui_0112 0.48 -0.6 111,440 - Dsui_0112 0.56 -1.2 111,472 + Dsui_0112 0.58 +0.7 111,480 - Dsui_0112 0.59 -2.6 111,504 - Dsui_0112 0.61 -2.8 111,507 + Dsui_0112 0.61 -1.3 111,515 - Dsui_0112 0.61 -0.6 111,532 + Dsui_0112 0.63 -1.6 111,540 - -0.6 111,654 - -0.6 111,656 + Dsui_0112 0.72 -0.3 111,664 - Dsui_0112 0.73 -0.6 111,738 - Dsui_0112 0.79 -3.1 111,753 + Dsui_0112 0.80 -1.2 111,866 + Dsui_0112 0.89 -2.6 111,867 + Dsui_0112 0.89 -0.6 111,877 + Dsui_0112 0.89 +0.4 111,885 - -0.6 111,892 + -0.6 111,905 + -1.6 111,910 + -1.7 111,988 - +0.4 112,040 - -1.2 112,052 - -1.2 112,059 + -1.2 112,060 - +0.4 112,228 + Dsui_0113 0.73 -1.6 112,236 - Dsui_0113 0.77 -0.6 112,268 - -0.6 112,299 + -0.6 112,300 - -0.6 112,300 - -2.4 112,300 - +0.4 112,385 + -1.6 112,389 - +0.4 112,431 + +0.4 112,434 - -0.6 112,562 + Dsui_0114 0.17 -1.2 112,562 + Dsui_0114 0.17 -2.6 112,570 - Dsui_0114 0.18 -0.6 112,601 - +0.4 112,613 + Dsui_0114 0.21 +0.4 112,620 + Dsui_0114 0.21 -2.6 112,623 - Dsui_0114 0.22 -1.2 112,740 + +0.4 112,748 - Dsui_0114 0.30 -2.0 112,763 - Dsui_0114 0.31 -1.2 112,886 - +0.4 112,913 - Dsui_0114 0.42 -0.6 112,918 - Dsui_0114 0.42 -0.6 112,928 - Dsui_0114 0.43 +0.4 112,935 + Dsui_0114 0.43 +0.4 112,941 + +0.4 112,949 - Dsui_0114 0.44 -1.2 112,966 + +0.4 112,990 + Dsui_0114 0.47 +0.4 112,990 + +0.4 112,990 + Dsui_0114 0.47 -2.0 113,030 + Dsui_0114 0.50 -1.2 113,115 + +0.4 113,146 + +0.4 113,173 - Dsui_0114 0.60 +0.4 113,187 + Dsui_0114 0.61 -0.0 113,255 + -0.6 113,287 - Dsui_0114 0.68 -1.2 113,321 + Dsui_0114 0.70 +0.4 113,336 - Dsui_0114 0.71 -1.2 113,383 + +0.4 113,427 - Dsui_0114 0.78 +0.4 113,437 - Dsui_0114 0.78 -1.6 113,437 - Dsui_0114 0.78 +0.4 113,443 - Dsui_0114 0.79 -0.6 113,446 + Dsui_0114 0.79 +0.4 113,457 + Dsui_0114 0.80 -0.6 113,462 + Dsui_0114 0.80 -2.0 113,497 - Dsui_0114 0.82 -2.8 113,533 + +0.4 113,543 + Dsui_0114 0.86 -2.0 113,636 + -0.6 113,644 - -1.2 113,685 - -0.6 113,726 - -2.2 113,751 - +0.4 113,795 - -1.2 113,805 - -0.6 113,896 + +0.4 113,896 + +0.4 113,904 - -1.1 113,904 - -2.8 113,985 - +0.4 113,999 + +0.4 114,006 - Dsui_0115 0.11 +0.8 114,030 - Dsui_0115 0.15 +0.7 114,051 - Dsui_0115 0.20 -0.7 114,062 + Dsui_0115 0.22 -0.6 114,121 + Dsui_0115 0.34 -0.6 114,185 - Dsui_0115 0.47 -0.2 114,206 - Dsui_0115 0.51 +0.7 114,285 + Dsui_0115 0.67 -1.6 114,293 - Dsui_0115 0.68 -0.2 114,331 - Dsui_0115 0.76 -0.6 114,421 + -1.2 114,444 - -1.4 114,496 - -0.6 114,499 + -1.6 114,514 + +0.4 114,562 + +0.4 114,615 - -1.6 114,621 + +0.4
Or see this region's nucleotide sequence