Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14845 and BWI76_RS14850 are separated by 366 nucleotides BWI76_RS14850 and BWI76_RS14855 are separated by 255 nucleotides
BWI76_RS14845: BWI76_RS14845 - hypothetical protein, at 3,109,422 to 3,110,048
_RS14845
BWI76_RS14850: BWI76_RS14850 - LacI family transcriptional regulator, at 3,110,415 to 3,111,446
_RS14850
BWI76_RS14855: BWI76_RS14855 - periplasmic binding protein/LacI transcriptional regulator, at 3,111,702 to 3,112,655
_RS14855
Position (kb)
3110
3111
3112 Strain fitness (log2 ratio)
-1
0
1 at 3109.674 kb on - strand, within BWI76_RS14845 at 3109.679 kb on - strand, within BWI76_RS14845 at 3109.803 kb on - strand, within BWI76_RS14845 at 3110.173 kb on - strand at 3110.219 kb on + strand at 3110.219 kb on + strand at 3110.219 kb on + strand at 3110.826 kb on - strand, within BWI76_RS14850 at 3110.991 kb on - strand, within BWI76_RS14850 at 3111.013 kb on - strand, within BWI76_RS14850 at 3111.266 kb on + strand, within BWI76_RS14850 at 3111.274 kb on - strand, within BWI76_RS14850 at 3111.330 kb on + strand, within BWI76_RS14850 at 3111.372 kb on - strand at 3111.468 kb on + strand at 3111.567 kb on + strand at 3111.651 kb on + strand at 3111.652 kb on + strand at 3111.660 kb on - strand at 3111.660 kb on - strand at 3111.660 kb on - strand at 3111.660 kb on - strand at 3111.842 kb on + strand, within BWI76_RS14855 at 3111.844 kb on - strand, within BWI76_RS14855 at 3111.907 kb on + strand, within BWI76_RS14855 at 3111.972 kb on - strand, within BWI76_RS14855 at 3112.231 kb on - strand, within BWI76_RS14855 at 3112.435 kb on + strand, within BWI76_RS14855
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 3,109,674 - BWI76_RS14845 0.40 +0.4 3,109,679 - BWI76_RS14845 0.41 -0.2 3,109,803 - BWI76_RS14845 0.61 +0.1 3,110,173 - -0.5 3,110,219 + +0.5 3,110,219 + +0.9 3,110,219 + +0.3 3,110,826 - BWI76_RS14850 0.40 -0.1 3,110,991 - BWI76_RS14850 0.56 +0.2 3,111,013 - BWI76_RS14850 0.58 +0.5 3,111,266 + BWI76_RS14850 0.82 +1.7 3,111,274 - BWI76_RS14850 0.83 +0.5 3,111,330 + BWI76_RS14850 0.89 +1.5 3,111,372 - -0.0 3,111,468 + +0.1 3,111,567 + +0.4 3,111,651 + +0.5 3,111,652 + -0.6 3,111,660 - +0.4 3,111,660 - +0.2 3,111,660 - -0.4 3,111,660 - -0.7 3,111,842 + BWI76_RS14855 0.15 -0.3 3,111,844 - BWI76_RS14855 0.15 +0.0 3,111,907 + BWI76_RS14855 0.21 -0.0 3,111,972 - BWI76_RS14855 0.28 +0.1 3,112,231 - BWI76_RS14855 0.55 +0.3 3,112,435 + BWI76_RS14855 0.77 +0.2
Or see this region's nucleotide sequence