Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08625 and BWI76_RS08630 are separated by 205 nucleotides BWI76_RS08630 and BWI76_RS08635 are separated by 67 nucleotides
BWI76_RS08625: BWI76_RS08625 - UDP-glucose 4-epimerase GalE, at 1,819,328 to 1,820,339
_RS08625
BWI76_RS08630: BWI76_RS08630 - molybdate ABC transporter ATP-binding protein ModF, at 1,820,545 to 1,822,020
_RS08630
BWI76_RS08635: BWI76_RS08635 - molybdenum-dependent transcriptional regulator, at 1,822,088 to 1,822,876
_RS08635
Position (kb)
1820
1821
1822
1823 Strain fitness (log2 ratio)
-1
0
1
2 at 1819.567 kb on - strand, within BWI76_RS08625 at 1819.866 kb on - strand, within BWI76_RS08625 at 1820.532 kb on + strand at 1820.540 kb on - strand at 1820.598 kb on + strand at 1820.623 kb on - strand at 1820.672 kb on + strand at 1820.706 kb on + strand, within BWI76_RS08630 at 1820.721 kb on + strand, within BWI76_RS08630 at 1820.890 kb on - strand, within BWI76_RS08630 at 1821.077 kb on + strand, within BWI76_RS08630 at 1821.092 kb on - strand, within BWI76_RS08630 at 1821.555 kb on + strand, within BWI76_RS08630 at 1821.580 kb on + strand, within BWI76_RS08630 at 1821.748 kb on + strand, within BWI76_RS08630 at 1821.952 kb on - strand at 1822.063 kb on - strand at 1822.231 kb on + strand, within BWI76_RS08635 at 1822.565 kb on + strand, within BWI76_RS08635 at 1822.640 kb on + strand, within BWI76_RS08635 at 1822.661 kb on + strand, within BWI76_RS08635 at 1822.711 kb on - strand, within BWI76_RS08635 at 1822.792 kb on - strand, within BWI76_RS08635 at 1822.807 kb on + strand at 1822.959 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 1,819,567 - BWI76_RS08625 0.24 +0.5 1,819,866 - BWI76_RS08625 0.53 +0.2 1,820,532 + +0.0 1,820,540 - +1.4 1,820,598 + -0.4 1,820,623 - +0.4 1,820,672 + +0.8 1,820,706 + BWI76_RS08630 0.11 +0.6 1,820,721 + BWI76_RS08630 0.12 +0.1 1,820,890 - BWI76_RS08630 0.23 +0.9 1,821,077 + BWI76_RS08630 0.36 -0.1 1,821,092 - BWI76_RS08630 0.37 +0.6 1,821,555 + BWI76_RS08630 0.68 -1.0 1,821,580 + BWI76_RS08630 0.70 +2.1 1,821,748 + BWI76_RS08630 0.82 -0.1 1,821,952 - -0.6 1,822,063 - +0.8 1,822,231 + BWI76_RS08635 0.18 -0.3 1,822,565 + BWI76_RS08635 0.60 -1.2 1,822,640 + BWI76_RS08635 0.70 +0.2 1,822,661 + BWI76_RS08635 0.73 -0.5 1,822,711 - BWI76_RS08635 0.79 +0.0 1,822,792 - BWI76_RS08635 0.89 -0.2 1,822,807 + +0.4 1,822,959 + -1.3
Or see this region's nucleotide sequence