Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08610

Experiment: D-Trehalose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08605 and BWI76_RS08610 are separated by 328 nucleotidesBWI76_RS08610 and BWI76_RS08615 overlap by 7 nucleotides BWI76_RS08605: BWI76_RS08605 - phosphoglyceromutase, at 1,815,003 to 1,815,755 _RS08605 BWI76_RS08610: BWI76_RS08610 - galactose-1-epimerase, at 1,816,084 to 1,817,127 _RS08610 BWI76_RS08615: BWI76_RS08615 - galactokinase, at 1,817,121 to 1,818,269 _RS08615 Position (kb) 1816 1817 1818Strain fitness (log2 ratio) -1 0 1at 1815.204 kb on - strand, within BWI76_RS08605at 1815.288 kb on - strand, within BWI76_RS08605at 1815.423 kb on - strand, within BWI76_RS08605at 1815.890 kb on + strandat 1815.950 kb on + strandat 1815.956 kb on + strandat 1815.959 kb on - strandat 1815.992 kb on - strandat 1815.993 kb on - strandat 1816.223 kb on + strand, within BWI76_RS08610at 1816.238 kb on - strand, within BWI76_RS08610at 1816.279 kb on - strand, within BWI76_RS08610at 1816.305 kb on - strand, within BWI76_RS08610at 1816.344 kb on - strand, within BWI76_RS08610at 1816.479 kb on - strand, within BWI76_RS08610at 1817.119 kb on + strandat 1817.129 kb on + strandat 1817.309 kb on + strand, within BWI76_RS08615at 1817.583 kb on - strand, within BWI76_RS08615at 1817.583 kb on - strand, within BWI76_RS08615at 1817.737 kb on + strand, within BWI76_RS08615at 1817.997 kb on + strand, within BWI76_RS08615

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Trehalose (C)
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1,815,204 - BWI76_RS08605 0.27 +0.5
1,815,288 - BWI76_RS08605 0.38 -0.0
1,815,423 - BWI76_RS08605 0.56 -0.4
1,815,890 + +0.5
1,815,950 + -0.4
1,815,956 + -0.1
1,815,959 - +0.1
1,815,992 - -0.0
1,815,993 - -0.1
1,816,223 + BWI76_RS08610 0.13 -0.4
1,816,238 - BWI76_RS08610 0.15 -0.1
1,816,279 - BWI76_RS08610 0.19 +0.2
1,816,305 - BWI76_RS08610 0.21 -0.0
1,816,344 - BWI76_RS08610 0.25 -0.4
1,816,479 - BWI76_RS08610 0.38 +0.4
1,817,119 + +0.2
1,817,129 + +0.6
1,817,309 + BWI76_RS08615 0.16 -0.0
1,817,583 - BWI76_RS08615 0.40 +0.2
1,817,583 - BWI76_RS08615 0.40 +0.0
1,817,737 + BWI76_RS08615 0.54 -0.5
1,817,997 + BWI76_RS08615 0.76 -0.1

Or see this region's nucleotide sequence