Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03385

Experiment: D-Glucosamine Hydrochloride (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03380 and AO353_03385 are separated by 3 nucleotidesAO353_03385 and AO353_03390 overlap by 8 nucleotides AO353_03380: AO353_03380 - sugar ABC transporter ATP-binding protein, at 719,615 to 720,775 _03380 AO353_03385: AO353_03385 - sugar ABC transporter permease, at 720,779 to 721,624 _03385 AO353_03390: AO353_03390 - sugar ABC transporter permease, at 721,617 to 722,525 _03390 Position (kb) 720 721 722Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7at 720.105 kb on + strand, within AO353_03380at 720.105 kb on + strand, within AO353_03380at 720.105 kb on + strand, within AO353_03380at 720.105 kb on + strand, within AO353_03380at 720.105 kb on + strand, within AO353_03380at 720.106 kb on - strand, within AO353_03380at 720.106 kb on - strand, within AO353_03380at 720.106 kb on - strand, within AO353_03380at 720.204 kb on + strand, within AO353_03380at 720.204 kb on + strand, within AO353_03380at 720.205 kb on - strand, within AO353_03380at 720.205 kb on - strand, within AO353_03380at 720.306 kb on + strand, within AO353_03380at 720.306 kb on + strand, within AO353_03380at 720.306 kb on + strand, within AO353_03380at 720.306 kb on + strand, within AO353_03380at 720.306 kb on + strand, within AO353_03380at 720.306 kb on + strand, within AO353_03380at 720.307 kb on - strand, within AO353_03380at 720.307 kb on - strand, within AO353_03380at 720.520 kb on - strand, within AO353_03380at 720.520 kb on - strand, within AO353_03380at 720.758 kb on + strandat 720.759 kb on - strandat 720.759 kb on - strandat 720.759 kb on - strandat 720.759 kb on - strandat 720.780 kb on + strandat 720.781 kb on - strandat 720.819 kb on + strandat 720.819 kb on + strandat 720.819 kb on + strandat 720.819 kb on + strandat 720.819 kb on + strandat 720.819 kb on + strandat 720.819 kb on + strandat 720.820 kb on - strandat 720.820 kb on - strandat 720.820 kb on - strandat 720.820 kb on - strandat 720.833 kb on + strandat 720.833 kb on + strandat 720.833 kb on + strandat 720.833 kb on + strandat 720.833 kb on + strandat 720.833 kb on + strandat 720.833 kb on + strandat 720.833 kb on + strandat 720.833 kb on + strandat 720.834 kb on - strandat 720.834 kb on - strandat 720.834 kb on - strandat 720.834 kb on - strandat 720.834 kb on - strandat 720.834 kb on - strandat 720.837 kb on + strandat 720.837 kb on + strandat 720.837 kb on + strandat 720.837 kb on + strandat 720.838 kb on - strandat 720.838 kb on - strandat 720.838 kb on - strandat 720.838 kb on - strandat 720.838 kb on - strandat 720.838 kb on - strandat 720.838 kb on - strandat 720.838 kb on - strandat 720.891 kb on + strand, within AO353_03385at 720.891 kb on + strand, within AO353_03385at 720.891 kb on + strand, within AO353_03385at 720.891 kb on + strand, within AO353_03385at 720.891 kb on + strand, within AO353_03385at 720.891 kb on + strand, within AO353_03385at 720.891 kb on + strand, within AO353_03385at 720.892 kb on - strand, within AO353_03385at 720.892 kb on - strand, within AO353_03385at 720.892 kb on - strand, within AO353_03385at 721.131 kb on + strand, within AO353_03385at 721.131 kb on + strand, within AO353_03385at 721.131 kb on + strand, within AO353_03385at 721.132 kb on - strand, within AO353_03385at 721.132 kb on - strand, within AO353_03385at 721.132 kb on - strand, within AO353_03385at 721.132 kb on - strand, within AO353_03385at 721.134 kb on + strand, within AO353_03385at 721.134 kb on + strand, within AO353_03385at 721.134 kb on + strand, within AO353_03385at 721.134 kb on + strand, within AO353_03385at 721.134 kb on + strand, within AO353_03385at 721.134 kb on + strand, within AO353_03385at 721.134 kb on + strand, within AO353_03385at 721.134 kb on + strand, within AO353_03385at 721.134 kb on + strand, within AO353_03385at 721.134 kb on + strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.135 kb on - strand, within AO353_03385at 721.170 kb on + strand, within AO353_03385at 721.335 kb on + strand, within AO353_03385at 721.335 kb on + strand, within AO353_03385at 721.336 kb on - strand, within AO353_03385at 721.336 kb on - strand, within AO353_03385at 721.336 kb on - strand, within AO353_03385at 721.407 kb on + strand, within AO353_03385at 721.407 kb on + strand, within AO353_03385at 721.415 kb on + strand, within AO353_03385at 721.542 kb on + strandat 721.542 kb on + strandat 721.542 kb on + strandat 721.543 kb on - strandat 721.572 kb on + strandat 721.572 kb on + strandat 721.572 kb on + strandat 721.573 kb on - strandat 721.573 kb on - strandat 721.573 kb on - strandat 721.573 kb on - strandat 721.618 kb on + strandat 721.618 kb on + strandat 721.619 kb on - strandat 721.619 kb on - strandat 721.648 kb on + strandat 721.649 kb on - strandat 721.649 kb on - strandat 721.655 kb on - strandat 721.655 kb on - strandat 721.655 kb on - strandat 721.744 kb on + strand, within AO353_03390at 721.744 kb on + strand, within AO353_03390at 721.744 kb on + strand, within AO353_03390at 721.744 kb on + strand, within AO353_03390at 721.744 kb on + strand, within AO353_03390at 721.744 kb on + strand, within AO353_03390at 721.744 kb on + strand, within AO353_03390at 721.744 kb on + strand, within AO353_03390at 721.744 kb on + strand, within AO353_03390at 721.745 kb on - strand, within AO353_03390at 721.745 kb on - strand, within AO353_03390at 721.745 kb on - strand, within AO353_03390at 721.745 kb on - strand, within AO353_03390at 721.745 kb on - strand, within AO353_03390at 721.745 kb on - strand, within AO353_03390at 721.745 kb on - strand, within AO353_03390at 721.745 kb on - strand, within AO353_03390at 721.774 kb on + strand, within AO353_03390at 721.775 kb on - strand, within AO353_03390at 721.775 kb on - strand, within AO353_03390at 721.894 kb on + strand, within AO353_03390at 721.894 kb on + strand, within AO353_03390at 721.894 kb on + strand, within AO353_03390at 721.894 kb on + strand, within AO353_03390at 721.894 kb on + strand, within AO353_03390at 721.894 kb on + strand, within AO353_03390at 721.894 kb on + strand, within AO353_03390at 721.894 kb on + strand, within AO353_03390at 722.026 kb on + strand, within AO353_03390at 722.026 kb on + strand, within AO353_03390at 722.027 kb on - strand, within AO353_03390at 722.027 kb on - strand, within AO353_03390at 722.176 kb on + strand, within AO353_03390at 722.176 kb on + strand, within AO353_03390at 722.176 kb on + strand, within AO353_03390at 722.176 kb on + strand, within AO353_03390at 722.176 kb on + strand, within AO353_03390at 722.176 kb on + strand, within AO353_03390at 722.176 kb on + strand, within AO353_03390at 722.176 kb on + strand, within AO353_03390at 722.176 kb on + strand, within AO353_03390at 722.177 kb on - strand, within AO353_03390at 722.177 kb on - strand, within AO353_03390at 722.177 kb on - strand, within AO353_03390at 722.177 kb on - strand, within AO353_03390at 722.177 kb on - strand, within AO353_03390at 722.177 kb on - strand, within AO353_03390at 722.177 kb on - strand, within AO353_03390at 722.177 kb on - strand, within AO353_03390at 722.332 kb on + strand, within AO353_03390at 722.332 kb on + strand, within AO353_03390at 722.332 kb on + strand, within AO353_03390at 722.332 kb on + strand, within AO353_03390at 722.332 kb on + strand, within AO353_03390at 722.333 kb on - strand, within AO353_03390at 722.333 kb on - strand, within AO353_03390at 722.333 kb on - strand, within AO353_03390at 722.333 kb on - strand, within AO353_03390at 722.333 kb on - strand, within AO353_03390at 722.333 kb on - strand, within AO353_03390at 722.333 kb on - strand, within AO353_03390at 722.333 kb on - strand, within AO353_03390at 722.356 kb on + strand, within AO353_03390at 722.356 kb on + strand, within AO353_03390at 722.356 kb on + strand, within AO353_03390at 722.357 kb on - strand, within AO353_03390at 722.357 kb on - strand, within AO353_03390at 722.357 kb on - strand, within AO353_03390at 722.357 kb on - strand, within AO353_03390at 722.357 kb on - strand, within AO353_03390at 722.357 kb on - strand, within AO353_03390at 722.357 kb on - strand, within AO353_03390at 722.410 kb on + strand, within AO353_03390at 722.410 kb on + strand, within AO353_03390at 722.410 kb on + strand, within AO353_03390at 722.410 kb on + strand, within AO353_03390at 722.410 kb on + strand, within AO353_03390at 722.411 kb on - strand, within AO353_03390at 722.411 kb on - strand, within AO353_03390at 722.411 kb on - strand, within AO353_03390at 722.416 kb on + strand, within AO353_03390at 722.417 kb on - strand, within AO353_03390at 722.417 kb on - strand, within AO353_03390at 722.417 kb on - strand, within AO353_03390at 722.574 kb on - strandat 722.574 kb on - strandat 722.574 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C)
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720,105 + AO353_03380 0.42 +2.9
720,105 + AO353_03380 0.42 +3.7
720,105 + AO353_03380 0.42 +3.4
720,105 + AO353_03380 0.42 +3.7
720,105 + AO353_03380 0.42 +3.0
720,106 - AO353_03380 0.42 +4.4
720,106 - AO353_03380 0.42 +3.4
720,106 - AO353_03380 0.42 +3.8
720,204 + AO353_03380 0.51 +3.2
720,204 + AO353_03380 0.51 +3.7
720,205 - AO353_03380 0.51 +4.3
720,205 - AO353_03380 0.51 +3.6
720,306 + AO353_03380 0.60 +1.9
720,306 + AO353_03380 0.60 +3.8
720,306 + AO353_03380 0.60 +3.7
720,306 + AO353_03380 0.60 +2.9
720,306 + AO353_03380 0.60 +4.3
720,306 + AO353_03380 0.60 +4.1
720,307 - AO353_03380 0.60 +3.8
720,307 - AO353_03380 0.60 +2.8
720,520 - AO353_03380 0.78 +6.9
720,520 - AO353_03380 0.78 +3.5
720,758 + +4.5
720,759 - +3.7
720,759 - +3.5
720,759 - +3.2
720,759 - +2.2
720,780 + +3.3
720,781 - +4.2
720,819 + +3.7
720,819 + +4.1
720,819 + +4.9
720,819 + +4.6
720,819 + +3.8
720,819 + +3.6
720,819 + +3.7
720,820 - +3.4
720,820 - +3.7
720,820 - +3.8
720,820 - +3.0
720,833 + +3.0
720,833 + +3.3
720,833 + +4.2
720,833 + +4.0
720,833 + +3.3
720,833 + +3.4
720,833 + +4.0
720,833 + +3.9
720,833 + +4.0
720,834 - +4.3
720,834 - +4.2
720,834 - +3.1
720,834 - +2.5
720,834 - +4.3
720,834 - +4.1
720,837 + +3.6
720,837 + +2.5
720,837 + +4.2
720,837 + +3.9
720,838 - +3.2
720,838 - +3.1
720,838 - +2.9
720,838 - +3.9
720,838 - +2.3
720,838 - +7.0
720,838 - +4.2
720,838 - +3.2
720,891 + AO353_03385 0.13 +3.0
720,891 + AO353_03385 0.13 +3.3
720,891 + AO353_03385 0.13 +3.9
720,891 + AO353_03385 0.13 +3.2
720,891 + AO353_03385 0.13 +4.1
720,891 + AO353_03385 0.13 +3.2
720,891 + AO353_03385 0.13 +4.3
720,892 - AO353_03385 0.13 +4.2
720,892 - AO353_03385 0.13 +2.9
720,892 - AO353_03385 0.13 +3.2
721,131 + AO353_03385 0.42 +4.2
721,131 + AO353_03385 0.42 +1.7
721,131 + AO353_03385 0.42 +3.5
721,132 - AO353_03385 0.42 +3.8
721,132 - AO353_03385 0.42 +2.3
721,132 - AO353_03385 0.42 +2.9
721,132 - AO353_03385 0.42 +3.1
721,134 + AO353_03385 0.42 +3.4
721,134 + AO353_03385 0.42 +3.7
721,134 + AO353_03385 0.42 +3.6
721,134 + AO353_03385 0.42 +3.5
721,134 + AO353_03385 0.42 +3.4
721,134 + AO353_03385 0.42 +3.5
721,134 + AO353_03385 0.42 +3.2
721,134 + AO353_03385 0.42 +3.1
721,134 + AO353_03385 0.42 +3.5
721,134 + AO353_03385 0.42 +4.5
721,135 - AO353_03385 0.42 +3.6
721,135 - AO353_03385 0.42 +4.0
721,135 - AO353_03385 0.42 +3.1
721,135 - AO353_03385 0.42 +3.7
721,135 - AO353_03385 0.42 +3.6
721,135 - AO353_03385 0.42 +3.6
721,135 - AO353_03385 0.42 +3.8
721,135 - AO353_03385 0.42 +4.9
721,135 - AO353_03385 0.42 +5.8
721,135 - AO353_03385 0.42 +4.1
721,135 - AO353_03385 0.42 +3.3
721,135 - AO353_03385 0.42 +2.8
721,135 - AO353_03385 0.42 +4.3
721,170 + AO353_03385 0.46 +4.0
721,335 + AO353_03385 0.66 +3.3
721,335 + AO353_03385 0.66 +2.0
721,336 - AO353_03385 0.66 +4.4
721,336 - AO353_03385 0.66 +3.3
721,336 - AO353_03385 0.66 +2.9
721,407 + AO353_03385 0.74 +3.2
721,407 + AO353_03385 0.74 +6.0
721,415 + AO353_03385 0.75 +3.6
721,542 + +4.3
721,542 + +4.0
721,542 + +2.9
721,543 - +3.7
721,572 + +4.1
721,572 + +4.0
721,572 + +3.5
721,573 - +3.6
721,573 - +3.9
721,573 - +4.0
721,573 - +4.3
721,618 + +3.4
721,618 + +4.4
721,619 - +3.1
721,619 - +4.7
721,648 + +3.4
721,649 - +3.8
721,649 - +3.4
721,655 - +3.8
721,655 - +4.7
721,655 - +4.3
721,744 + AO353_03390 0.14 +3.5
721,744 + AO353_03390 0.14 +3.1
721,744 + AO353_03390 0.14 +4.5
721,744 + AO353_03390 0.14 +2.5
721,744 + AO353_03390 0.14 +4.3
721,744 + AO353_03390 0.14 +2.5
721,744 + AO353_03390 0.14 +2.9
721,744 + AO353_03390 0.14 +4.0
721,744 + AO353_03390 0.14 +4.0
721,745 - AO353_03390 0.14 +3.7
721,745 - AO353_03390 0.14 +3.5
721,745 - AO353_03390 0.14 +3.0
721,745 - AO353_03390 0.14 +3.8
721,745 - AO353_03390 0.14 +3.5
721,745 - AO353_03390 0.14 +3.2
721,745 - AO353_03390 0.14 +2.6
721,745 - AO353_03390 0.14 +3.0
721,774 + AO353_03390 0.17 +4.1
721,775 - AO353_03390 0.17 +3.3
721,775 - AO353_03390 0.17 +3.3
721,894 + AO353_03390 0.30 +4.1
721,894 + AO353_03390 0.30 +3.7
721,894 + AO353_03390 0.30 +3.8
721,894 + AO353_03390 0.30 +3.6
721,894 + AO353_03390 0.30 +3.7
721,894 + AO353_03390 0.30 +3.7
721,894 + AO353_03390 0.30 +4.6
721,894 + AO353_03390 0.30 +4.3
722,026 + AO353_03390 0.45 +3.6
722,026 + AO353_03390 0.45 +0.7
722,027 - AO353_03390 0.45 +3.0
722,027 - AO353_03390 0.45 +2.9
722,176 + AO353_03390 0.61 +3.4
722,176 + AO353_03390 0.61 +3.7
722,176 + AO353_03390 0.61 +3.7
722,176 + AO353_03390 0.61 +3.5
722,176 + AO353_03390 0.61 +3.4
722,176 + AO353_03390 0.61 +4.0
722,176 + AO353_03390 0.61 +3.9
722,176 + AO353_03390 0.61 +3.3
722,176 + AO353_03390 0.61 +3.3
722,177 - AO353_03390 0.62 +4.4
722,177 - AO353_03390 0.62 +4.3
722,177 - AO353_03390 0.62 +2.8
722,177 - AO353_03390 0.62 +3.6
722,177 - AO353_03390 0.62 +3.2
722,177 - AO353_03390 0.62 +3.9
722,177 - AO353_03390 0.62 +3.2
722,177 - AO353_03390 0.62 +3.3
722,332 + AO353_03390 0.79 +3.1
722,332 + AO353_03390 0.79 +3.7
722,332 + AO353_03390 0.79 +2.8
722,332 + AO353_03390 0.79 +3.6
722,332 + AO353_03390 0.79 +4.1
722,333 - AO353_03390 0.79 +3.7
722,333 - AO353_03390 0.79 +3.6
722,333 - AO353_03390 0.79 +3.9
722,333 - AO353_03390 0.79 +3.9
722,333 - AO353_03390 0.79 +3.6
722,333 - AO353_03390 0.79 +4.2
722,333 - AO353_03390 0.79 +4.0
722,333 - AO353_03390 0.79 +3.6
722,356 + AO353_03390 0.81 +3.6
722,356 + AO353_03390 0.81 +4.2
722,356 + AO353_03390 0.81 +3.3
722,357 - AO353_03390 0.81 +3.2
722,357 - AO353_03390 0.81 +4.3
722,357 - AO353_03390 0.81 +3.5
722,357 - AO353_03390 0.81 +4.4
722,357 - AO353_03390 0.81 +4.2
722,357 - AO353_03390 0.81 +3.7
722,357 - AO353_03390 0.81 +4.0
722,410 + AO353_03390 0.87 +3.6
722,410 + AO353_03390 0.87 +4.1
722,410 + AO353_03390 0.87 +3.7
722,410 + AO353_03390 0.87 +3.4
722,410 + AO353_03390 0.87 +3.9
722,411 - AO353_03390 0.87 +3.5
722,411 - AO353_03390 0.87 +3.9
722,411 - AO353_03390 0.87 +3.3
722,416 + AO353_03390 0.88 +4.3
722,417 - AO353_03390 0.88 +3.2
722,417 - AO353_03390 0.88 +3.4
722,417 - AO353_03390 0.88 +3.1
722,574 - +3.8
722,574 - +2.7
722,574 - +2.2

Or see this region's nucleotide sequence