Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0260 and BT0261 are separated by 8 nucleotides BT0261 and BT0262 are separated by 357 nucleotides BT0262 and BT0263 are separated by 95 nucleotides
BT0260: BT0260 - acyltransferase family protein (NCBI ptt file), at 291,378 to 291,932
BT0260
BT0261: BT0261 - hypothetical protein (NCBI ptt file), at 291,941 to 292,210
BT0261
BT0262: BT0262 - hypothetical protein (NCBI ptt file), at 292,568 to 293,203
BT0262
BT0263: BT0263 - hypothetical protein (NCBI ptt file), at 293,299 to 294,711
BT0263
Position (kb) 292
293
294 Strain fitness (log2 ratio) -2
-1
0
1 at 291.864 kb on - strand, within BT0260 at 292.010 kb on - strand, within BT0261 at 292.118 kb on - strand, within BT0261 at 292.136 kb on - strand, within BT0261 at 292.174 kb on - strand, within BT0261 at 292.174 kb on - strand, within BT0261 at 292.234 kb on - strand at 292.343 kb on + strand at 292.520 kb on - strand at 292.520 kb on - strand at 292.687 kb on - strand, within BT0262 at 292.687 kb on - strand, within BT0262 at 292.691 kb on - strand, within BT0262 at 292.760 kb on - strand, within BT0262 at 292.915 kb on - strand, within BT0262 at 292.955 kb on - strand, within BT0262 at 292.955 kb on - strand, within BT0262 at 292.957 kb on - strand, within BT0262 at 292.957 kb on - strand, within BT0262 at 292.960 kb on + strand, within BT0262 at 293.006 kb on + strand, within BT0262 at 293.008 kb on + strand, within BT0262 at 293.053 kb on - strand, within BT0262 at 293.053 kb on - strand, within BT0262 at 293.062 kb on + strand, within BT0262 at 293.103 kb on + strand, within BT0262 at 293.126 kb on - strand, within BT0262 at 293.126 kb on - strand, within BT0262 at 293.128 kb on - strand, within BT0262 at 293.151 kb on - strand at 293.217 kb on + strand at 293.245 kb on - strand at 293.250 kb on + strand at 293.256 kb on + strand at 293.339 kb on - strand at 293.419 kb on + strand at 293.484 kb on + strand, within BT0263 at 293.484 kb on + strand, within BT0263 at 293.508 kb on + strand, within BT0263 at 293.509 kb on - strand, within BT0263 at 293.552 kb on + strand, within BT0263 at 293.586 kb on - strand, within BT0263 at 293.589 kb on - strand, within BT0263 at 293.634 kb on + strand, within BT0263 at 293.722 kb on - strand, within BT0263 at 293.769 kb on + strand, within BT0263 at 293.885 kb on - strand, within BT0263 at 293.904 kb on + strand, within BT0263 at 293.904 kb on + strand, within BT0263 at 293.969 kb on - strand, within BT0263 at 293.978 kb on + strand, within BT0263 at 293.978 kb on + strand, within BT0263 at 293.979 kb on - strand, within BT0263 at 294.008 kb on - strand, within BT0263 at 294.032 kb on - strand, within BT0263 at 294.036 kb on + strand, within BT0263 at 294.046 kb on + strand, within BT0263 at 294.047 kb on - strand, within BT0263 at 294.064 kb on - strand, within BT0263 at 294.102 kb on + strand, within BT0263 at 294.102 kb on + strand, within BT0263 at 294.105 kb on - strand, within BT0263
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 291,864 - BT0260 0.88 -0.4 292,010 - BT0261 0.26 -2.3 292,118 - BT0261 0.66 -1.8 292,136 - BT0261 0.72 -0.7 292,174 - BT0261 0.86 -0.4 292,174 - BT0261 0.86 -1.3 292,234 - -0.9 292,343 + -0.4 292,520 - -1.5 292,520 - -0.6 292,687 - BT0262 0.19 -0.2 292,687 - BT0262 0.19 -1.5 292,691 - BT0262 0.19 +1.6 292,760 - BT0262 0.30 +0.5 292,915 - BT0262 0.55 +0.4 292,955 - BT0262 0.61 -0.4 292,955 - BT0262 0.61 +0.2 292,957 - BT0262 0.61 -0.7 292,957 - BT0262 0.61 -1.4 292,960 + BT0262 0.62 +0.6 293,006 + BT0262 0.69 +1.2 293,008 + BT0262 0.69 +0.5 293,053 - BT0262 0.76 +0.6 293,053 - BT0262 0.76 +0.5 293,062 + BT0262 0.78 -0.9 293,103 + BT0262 0.84 -0.9 293,126 - BT0262 0.88 +1.6 293,126 - BT0262 0.88 -0.4 293,128 - BT0262 0.88 -0.3 293,151 - +1.6 293,217 + -1.5 293,245 - -1.7 293,250 + +0.4 293,256 + +0.7 293,339 - +0.6 293,419 + -1.8 293,484 + BT0263 0.13 -1.3 293,484 + BT0263 0.13 -0.4 293,508 + BT0263 0.15 +0.9 293,509 - BT0263 0.15 +0.6 293,552 + BT0263 0.18 +0.1 293,586 - BT0263 0.20 +0.4 293,589 - BT0263 0.21 -0.9 293,634 + BT0263 0.24 -0.7 293,722 - BT0263 0.30 -0.6 293,769 + BT0263 0.33 -0.7 293,885 - BT0263 0.41 -1.3 293,904 + BT0263 0.43 -0.9 293,904 + BT0263 0.43 -1.3 293,969 - BT0263 0.47 -1.2 293,978 + BT0263 0.48 -1.1 293,978 + BT0263 0.48 -0.2 293,979 - BT0263 0.48 -1.4 294,008 - BT0263 0.50 -1.3 294,032 - BT0263 0.52 -0.4 294,036 + BT0263 0.52 -0.7 294,046 + BT0263 0.53 -0.5 294,047 - BT0263 0.53 +0.1 294,064 - BT0263 0.54 -0.5 294,102 + BT0263 0.57 -1.3 294,102 + BT0263 0.57 -1.4 294,105 - BT0263 0.57 +0.5
Or see this region's nucleotide sequence