Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08215

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,545,809	-		MMP_RS08205	0.44	+0.9
1,545,815	+		MMP_RS08205	0.45	+0.6
1,545,842	+		MMP_RS08205	0.50	+0.1
1,545,864	-		MMP_RS08205	0.54	+0.3
1,545,865	+		MMP_RS08205	0.54	+0.2
1,545,865	+		MMP_RS08205	0.54	-0.1
1,545,866	-		MMP_RS08205	0.54	+0.1
1,545,867	+		MMP_RS08205	0.54	-0.1
1,545,867	+		MMP_RS08205	0.54	-0.2
1,545,867	+		MMP_RS08205	0.54	-0.1
1,545,867	+		MMP_RS08205	0.54	+0.0
1,545,867	+		MMP_RS08205	0.54	+0.1
1,545,870	-		MMP_RS08205	0.55	-0.4
1,545,870	-		MMP_RS08205	0.55	+0.1
1,546,025	+		MMP_RS08205	0.81	+0.5
1,546,084	+				+0.3
1,546,258	-		MMP_RS08210	0.21	-1.8
1,546,278	+		MMP_RS08210	0.25	-1.2
1,546,508	+		MMP_RS08210	0.72	-3.3
1,546,590	-		MMP_RS08210	0.89	-1.0
1,546,651	-				+0.0
1,546,685	+				-0.2
1,546,693	-				-1.5
1,546,694	+				-0.3
1,546,695	-				-1.7
1,546,696	+				+0.8
1,546,696	+				-0.4
1,546,746	-				-0.4
1,546,840	+		MMP_RS08215	0.20	+0.4
1,547,033	+		MMP_RS08215	0.55	+0.8
1,547,033	+		MMP_RS08215	0.55	-0.2
1,547,064	+		MMP_RS08215	0.61	-0.1
1,547,374	-				-2.8
1,547,500	-				-0.9
1,547,501	+				-2.7
1,547,996	+				+0.1
1,548,000	-				-0.4
1,548,009	+				-0.1
1,548,017	+				-0.4
1,548,062	-				-0.5
1,548,088	+		MMP_RS08225	0.12	-0.6