Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08100

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,523,088	+				-0.0
1,523,091	-				-0.8
1,523,092	+				+0.5
1,523,092	+				+0.5
1,523,092	+				+0.2
1,523,093	-				-0.4
1,523,093	-				-0.1
1,523,094	+				+0.1
1,523,095	-				-0.3
1,523,095	-				+0.1
1,523,104	+				-0.2
1,523,104	+				+0.0
1,523,156	-		MMP_RS08090	0.10	+0.2
1,523,367	-		MMP_RS08090	0.81	+0.4
1,523,371	+		MMP_RS08090	0.82	-0.1
1,523,371	+		MMP_RS08090	0.82	+0.1
1,523,392	+		MMP_RS08090	0.90	+0.5
1,523,451	-				-0.1
1,523,575	+		MMP_RS08095	0.25	-0.6
1,523,707	-		MMP_RS08095	0.48	-0.4
1,523,758	-		MMP_RS08095	0.57	-0.3
1,523,762	-		MMP_RS08095	0.57	-0.9
1,523,763	+		MMP_RS08095	0.57	+0.4
1,523,801	+		MMP_RS08095	0.64	-0.3
1,523,815	-		MMP_RS08095	0.66	+0.0
1,523,920	+		MMP_RS08095	0.85	-0.3
1,523,924	-		MMP_RS08095	0.86	-0.1
1,523,925	+		MMP_RS08095	0.86	-0.4
1,523,925	+		MMP_RS08095	0.86	-0.4
1,523,925	+		MMP_RS08095	0.86	+0.2
1,523,931	-		MMP_RS08095	0.87	-0.1
1,523,962	-				-1.2
1,523,965	+				-0.6
1,523,965	+				-0.3
1,523,965	+				-1.0
1,524,040	+				-0.6
1,524,058	-				-0.6
1,524,254	-		MMP_RS08100	0.17	-0.5
1,524,424	-		MMP_RS08100	0.32	-0.3
1,524,428	-		MMP_RS08100	0.32	-0.6
1,524,443	-		MMP_RS08100	0.34	+0.1
1,524,550	+		MMP_RS08100	0.43	-0.2
1,524,631	-		MMP_RS08100	0.50	-0.5
1,524,732	+		MMP_RS08100	0.60	-0.6
1,524,748	+		MMP_RS08100	0.61	-0.5
1,524,915	-		MMP_RS08100	0.76	-0.8
1,525,392	+		MMP_RS08105	0.27	-1.1
1,525,437	+		MMP_RS08105	0.34	+0.0
1,525,544	-		MMP_RS08105	0.48	-0.0
1,525,565	+		MMP_RS08105	0.51	-0.4
1,525,565	+		MMP_RS08105	0.51	-1.9
1,525,585	-		MMP_RS08105	0.54	-0.3
1,525,602	+		MMP_RS08105	0.56	-0.3
1,525,621	-		MMP_RS08105	0.59	+0.3
1,525,673	-		MMP_RS08105	0.66	-0.3
1,525,722	+		MMP_RS08105	0.72	-0.1
1,526,061	+				-0.0
1,526,064	-				+0.1
1,526,066	-				+0.0
1,526,067	+				+0.1
1,526,069	+				+0.1
1,526,069	+				+0.3
1,526,085	+				-0.4
1,526,119	-				+0.2
1,526,129	+		MMP_RS09035	0.12	+0.6