Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07860

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,488,315	-		MMP_RS07855	0.12	-0.3
1,488,381	-		MMP_RS07855	0.22	+0.4
1,488,382	+		MMP_RS07855	0.22	+0.4
1,488,383	-		MMP_RS07855	0.22	+0.6
1,488,383	-		MMP_RS07855	0.22	+0.2
1,488,386	+		MMP_RS07855	0.22	+0.1
1,488,703	-		MMP_RS07855	0.67	+0.2
1,488,703	-		MMP_RS07855	0.67	+0.6
1,488,703	-		MMP_RS07855	0.67	-0.0
1,488,704	+		MMP_RS07855	0.67	+0.4
1,488,704	+		MMP_RS07855	0.67	+0.3
1,488,704	+		MMP_RS07855	0.67	-0.4
1,488,705	-		MMP_RS07855	0.67	+0.3
1,488,705	-		MMP_RS07855	0.67	-0.1
1,488,706	+		MMP_RS07855	0.67	+0.8
1,488,706	+		MMP_RS07855	0.67	+0.1
1,488,733	-		MMP_RS07855	0.71	-0.1
1,488,734	+		MMP_RS07855	0.71	+0.1
1,488,913	+				+0.4
1,488,953	+				+0.0
1,488,953	+				+0.3
1,489,071	-		MMP_RS07860	0.47	-0.4
1,489,198	+				+0.3
1,489,227	-				+0.1
1,489,228	+				+0.1
1,489,228	+				-0.6
1,489,228	+				+0.2
1,489,229	-				+0.4
1,489,299	+				-4.0
1,489,551	+				-3.1
1,489,646	+				+1.0
1,489,779	+				-1.0
1,490,084	-				-1.2
1,490,126	+				-1.4