Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07445

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,416,446	+		MMP_RS07435	0.68	-0.2
1,416,627	-				+0.5
1,416,627	-				+0.5
1,416,640	-				+0.0
1,416,685	+				-0.6
1,416,686	-				-0.7
1,416,686	-				-0.1
1,416,689	-				-0.3
1,417,056	+				-4.6
1,417,226	-				-1.6
1,417,226	-				-1.9
1,417,350	+				+0.2
1,417,354	+				-1.1
1,417,458	-				-2.0
1,417,627	+		MMP_RS07445	0.31	-0.5
1,417,679	-		MMP_RS07445	0.40	-0.4
1,417,763	+		MMP_RS07445	0.53	-0.5
1,417,783	-		MMP_RS07445	0.56	-2.0
1,417,783	-		MMP_RS07445	0.56	-2.9
1,417,784	+		MMP_RS07445	0.56	-2.5
1,417,789	+		MMP_RS07445	0.57	-1.9
1,417,790	-		MMP_RS07445	0.57	-2.6
1,417,791	+		MMP_RS07445	0.57	-2.3
1,417,791	+		MMP_RS07445	0.57	-2.0
1,417,795	+		MMP_RS07445	0.58	-2.0
1,417,802	+		MMP_RS07445	0.59	-1.5
1,417,914	-		MMP_RS07445	0.76	-2.5
1,417,963	+		MMP_RS07445	0.84	-3.3
1,417,986	+		MMP_RS07445	0.88	-2.5
1,418,023	-				-1.3
1,418,024	+				-1.1
1,418,028	-				-2.8
1,418,085	+				-2.3
1,418,089	+				-1.8
1,418,117	+				-3.4
1,418,231	+				-3.0
1,418,239	-				-1.2
1,418,261	+				-1.5
1,418,319	+				-1.1
1,418,327	-				-1.1
1,418,348	-				-1.5
1,418,507	-				-1.6
1,418,868	+				-0.7
1,418,953	-				-1.7