Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07190

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,377,393	+				+0.0
1,377,581	+				+0.6
1,377,590	-				+0.2
1,377,611	+				-0.3
1,377,624	-				-0.1
1,377,651	-				+0.7
1,377,652	+				+0.1
1,377,652	+				-0.2
1,377,654	-				+0.2
1,377,655	+				+0.4
1,377,655	+				-0.0
1,377,656	-				+0.6
1,377,733	+				+0.4
1,377,866	-				-0.6
1,377,867	+				-0.2
1,377,931	+				-0.2
1,378,017	-				-0.6
1,378,113	+		MMP_RS07190	0.11	-0.7
1,378,464	-		MMP_RS07190	0.20	-0.5
1,379,489	-		MMP_RS07190	0.49	-0.9
1,379,636	+		MMP_RS07190	0.53	-1.4
1,379,656	+		MMP_RS07190	0.54	-0.5
1,379,832	-		MMP_RS07190	0.59	+0.1
1,380,150	+		MMP_RS07190	0.68	-0.6
1,380,205	+		MMP_RS07190	0.69	-0.6
1,380,492	+		MMP_RS07190	0.77	-1.4
1,380,570	-		MMP_RS07190	0.79	-1.1
1,380,611	+		MMP_RS07190	0.81	-0.0
1,380,675	+		MMP_RS07190	0.82	-0.3
1,380,917	-		MMP_RS07190	0.89	-0.3
1,380,917	-		MMP_RS07190	0.89	-0.6
1,381,260	+				-0.8
1,381,347	-				+0.3
1,381,390	+				+0.2
1,381,390	+				+0.1
1,381,468	-		MMP_RS07195	0.10	-0.4
1,381,469	+		MMP_RS07195	0.10	-0.0
1,381,471	+		MMP_RS07195	0.11	-0.5
1,381,549	+		MMP_RS07195	0.17	-0.1
1,381,608	-		MMP_RS07195	0.22	-0.4
1,381,611	+		MMP_RS07195	0.22	+0.0
1,381,772	+		MMP_RS07195	0.35	+0.2
1,381,773	-		MMP_RS07195	0.35	+0.1
1,381,839	+		MMP_RS07195	0.40	-0.1
1,382,075	-		MMP_RS07195	0.59	-0.4
1,382,116	+		MMP_RS07195	0.62	+0.1
1,382,217	+		MMP_RS07195	0.70	-0.1
1,382,304	-		MMP_RS07195	0.77	-0.6