Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06720

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,289,772	-		MMP_RS06715	0.55	-3.0
1,289,826	-		MMP_RS06715	0.58	-1.9
1,289,860	+		MMP_RS06715	0.60	-3.2
1,289,977	-		MMP_RS06715	0.66	-2.5
1,290,051	-		MMP_RS06715	0.70	-3.6
1,290,105	-		MMP_RS06715	0.72	-2.3
1,290,105	-		MMP_RS06715	0.72	-2.3
1,290,134	+		MMP_RS06715	0.74	-2.4
1,290,140	+		MMP_RS06715	0.74	-2.3
1,290,194	-		MMP_RS06715	0.77	-2.7
1,290,202	-		MMP_RS06715	0.77	-2.5
1,290,260	-		MMP_RS06715	0.80	-2.8
1,290,260	-		MMP_RS06715	0.80	-3.1
1,290,413	+		MMP_RS06715	0.88	-2.0
1,290,416	+		MMP_RS06715	0.89	-2.7
1,290,422	+		MMP_RS06715	0.89	-1.8
1,290,422	+		MMP_RS06715	0.89	-3.3
1,290,626	+				-1.6
1,290,679	-				-2.4
1,290,749	+		MMP_RS06720	0.24	-2.5
1,290,945	-		MMP_RS06720	0.79	-3.4
1,290,949	-		MMP_RS06720	0.80	-2.4
1,290,980	-		MMP_RS06720	0.88	-1.6
1,290,981	+		MMP_RS06720	0.89	-1.4
1,290,981	+		MMP_RS06720	0.89	-3.0
1,290,983	-		MMP_RS06720	0.89	-2.5
1,290,985	-		MMP_RS06720	0.90	-2.6
1,290,985	-		MMP_RS06720	0.90	-3.6
1,290,986	+				-2.1
1,290,986	+				-2.5
1,291,044	-				-0.4
1,291,045	+				+0.0
1,291,052	-				-0.4
1,291,052	-				+0.1
1,291,125	+				+1.0
1,291,125	+				+0.4
1,291,126	-				+0.2
1,291,176	+				-0.2
1,291,176	+				+0.8
1,291,177	-				+0.0
1,291,178	+				+1.0
1,291,178	+				+0.9
1,291,212	+				+0.2
1,291,220	-				-0.2
1,291,264	+				+0.2
1,291,428	-		MMP_RS06725	0.14	+0.4
1,291,440	+		MMP_RS06725	0.14	-0.2
1,291,476	-		MMP_RS06725	0.17	+0.2
1,291,637	+		MMP_RS06725	0.28	-0.4
1,291,640	-		MMP_RS06725	0.29	-0.1
1,291,641	+		MMP_RS06725	0.29	+0.2
1,291,641	+		MMP_RS06725	0.29	-0.2
1,291,641	+		MMP_RS06725	0.29	-0.1
1,291,687	+		MMP_RS06725	0.32	-0.2
1,291,756	+		MMP_RS06725	0.37	-2.0
1,291,756	+		MMP_RS06725	0.37	+0.1
1,291,756	+		MMP_RS06725	0.37	+0.5
1,291,759	-		MMP_RS06725	0.37	-0.3
1,291,759	-		MMP_RS06725	0.37	-0.4
1,291,789	+		MMP_RS06725	0.39	-0.9
1,291,789	+		MMP_RS06725	0.39	+0.6
1,291,791	-		MMP_RS06725	0.39	+0.2
1,291,792	+		MMP_RS06725	0.40	+0.8
1,291,821	+		MMP_RS06725	0.42	+1.0
1,291,837	-		MMP_RS06725	0.43	+0.4
1,291,847	+		MMP_RS06725	0.43	+0.1
1,291,852	-		MMP_RS06725	0.44	+0.8
1,291,882	+		MMP_RS06725	0.46	+0.1
1,291,938	+		MMP_RS06725	0.50	+0.8
1,291,965	-		MMP_RS06725	0.52	-0.0
1,291,965	-		MMP_RS06725	0.52	-0.1
1,292,009	-		MMP_RS06725	0.55	+0.7