Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06685

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,282,867	-		MMP_RS06680	0.21	-2.7
1,282,901	-		MMP_RS06680	0.24	-4.1
1,282,901	-		MMP_RS06680	0.24	-2.8
1,282,901	-		MMP_RS06680	0.24	-2.4
1,282,901	-		MMP_RS06680	0.24	-3.5
1,282,902	+		MMP_RS06680	0.24	-2.9
1,282,928	+		MMP_RS06680	0.26	-2.8
1,283,339	-		MMP_RS06680	0.62	-4.5
1,283,364	-		MMP_RS06680	0.64	-3.6
1,283,432	+		MMP_RS06680	0.70	-3.4
1,283,432	+		MMP_RS06680	0.70	-3.1
1,283,432	+		MMP_RS06680	0.70	-4.3
1,283,433	-		MMP_RS06680	0.70	-2.5
1,283,435	-		MMP_RS06680	0.70	-3.8
1,283,435	-		MMP_RS06680	0.70	-3.0
1,283,435	-		MMP_RS06680	0.70	-3.3
1,283,435	-		MMP_RS06680	0.70	-4.1
1,283,436	+		MMP_RS06680	0.70	-3.8
1,283,436	+		MMP_RS06680	0.70	-5.5
1,283,528	-		MMP_RS06680	0.78	-3.4
1,283,742	+				-4.5
1,283,788	-				-3.3
1,283,977	-				-3.2
1,284,238	-		MMP_RS06685	0.21	-3.6
1,284,559	-		MMP_RS06685	0.36	-3.1
1,284,638	+		MMP_RS06685	0.40	-4.2
1,284,686	-		MMP_RS06685	0.43	-3.0
1,284,762	-		MMP_RS06685	0.46	-3.6
1,284,763	+		MMP_RS06685	0.47	-3.3
1,284,821	+		MMP_RS06685	0.49	-2.1
1,284,982	+		MMP_RS06685	0.57	-0.8
1,284,986	-		MMP_RS06685	0.58	-2.6
1,285,051	-		MMP_RS06685	0.61	-3.6
1,285,200	-		MMP_RS06685	0.68	-3.9
1,285,216	-		MMP_RS06685	0.69	-4.8
1,285,226	-		MMP_RS06685	0.69	-3.5
1,285,362	-		MMP_RS06685	0.76	-4.3
1,285,379	+		MMP_RS06685	0.77	-2.9
1,285,379	+		MMP_RS06685	0.77	-3.1
1,285,477	+		MMP_RS06685	0.82	-3.1
1,285,480	+		MMP_RS06685	0.82	-2.5
1,285,490	+		MMP_RS06685	0.82	-3.4
1,285,513	-		MMP_RS06685	0.84	-3.3
1,285,513	-		MMP_RS06685	0.84	-3.0
1,285,514	+		MMP_RS06685	0.84	-2.7
1,285,517	-		MMP_RS06685	0.84	-3.6
1,285,517	-		MMP_RS06685	0.84	-3.8
1,285,518	+		MMP_RS06685	0.84	-5.8
1,285,518	+		MMP_RS06685	0.84	-2.2
1,285,603	-		MMP_RS06685	0.88	-3.7
1,285,669	+				-3.3
1,285,697	-				-2.6
1,285,698	+				-3.5
1,285,702	+				-2.8
1,285,824	-				-2.7
1,285,863	+				-4.2
1,285,871	+				-3.7
1,285,894	-				-3.9
1,285,952	+				-2.2
1,285,955	-				-3.5
1,285,955	-				-3.0
1,285,976	+				-3.2
1,285,988	-				-3.9
1,286,009	-				-1.9
1,286,010	+				-5.1
1,286,011	-				-2.8
1,286,011	-				-3.4
1,286,011	-				-2.7
1,286,012	+				-3.9
1,286,012	+				-2.5
1,286,015	-				-2.3
1,286,015	-				-2.2
1,286,016	+				-3.3
1,286,016	+				-3.2
1,286,019	-				-3.7
1,286,019	-				-2.1
1,286,019	-				-2.9
1,286,021	-				-4.0
1,286,025	+				-2.5
1,286,029	-				-2.6
1,286,063	+				-2.9
1,286,080	+				-3.6
1,286,090	-				-3.1
1,286,178	+				-3.0
1,286,186	-				-3.0
1,286,603	+				-3.2
1,286,725	-		MMP_RS06700	0.20	-4.3
1,286,726	+		MMP_RS06700	0.20	-3.3
1,286,726	+		MMP_RS06700	0.20	-2.6
1,286,831	-		MMP_RS06700	0.40	-3.7
1,286,831	-		MMP_RS06700	0.40	-4.2
1,286,832	+		MMP_RS06700	0.40	-4.1
1,286,833	-		MMP_RS06700	0.40	-4.5
1,286,836	-		MMP_RS06700	0.40	-4.3