Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06670

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,278,987	+		MMP_RS06665	0.46	+0.4
1,279,004	+		MMP_RS06665	0.47	+0.2
1,279,024	+		MMP_RS06665	0.48	+0.3
1,279,135	+		MMP_RS06665	0.55	-0.1
1,279,273	+		MMP_RS06665	0.64	-0.4
1,279,382	-		MMP_RS06665	0.71	+0.1
1,279,552	+		MMP_RS06665	0.82	+0.1
1,279,552	+		MMP_RS06665	0.82	+0.5
1,279,582	-		MMP_RS06665	0.84	+0.3
1,279,880	+				+0.5
1,279,891	+				+0.7
1,279,932	+				+0.2
1,280,044	-		MMP_RS06670	0.14	-0.5
1,280,048	-		MMP_RS06670	0.14	+0.8
1,280,053	+		MMP_RS06670	0.14	+0.4
1,280,149	-		MMP_RS06670	0.21	+1.4
1,280,191	+		MMP_RS06670	0.25	-0.7
1,280,195	-		MMP_RS06670	0.25	+0.3
1,280,541	+		MMP_RS06670	0.51	-0.2
1,280,612	-		MMP_RS06670	0.57	+0.3
1,280,612	-		MMP_RS06670	0.57	-1.0
1,280,784	-		MMP_RS06670	0.70	+0.5
1,280,828	+		MMP_RS06670	0.73	-0.4
1,280,837	-		MMP_RS06670	0.74	+0.6
1,280,837	-		MMP_RS06670	0.74	+1.4
1,280,838	+		MMP_RS06670	0.74	+0.4
1,280,838	+		MMP_RS06670	0.74	+0.3
1,281,148	+				+0.0
1,281,150	+				+0.5
1,281,151	-				+0.0
1,281,152	+				+0.1
1,281,162	-				-0.1
1,281,169	-				+1.4
1,281,170	+				-0.1
1,281,170	+				-0.2
1,281,218	-				-0.5
1,281,219	+				+0.6
1,281,257	+				-0.1
1,281,261	-				+0.2
1,281,261	-				-0.5
1,281,261	-				+0.3
1,281,262	+				+0.7
1,281,319	-				+0.8
1,281,496	+		MMP_RS06675	0.21	-0.3
1,281,496	+		MMP_RS06675	0.21	-0.2
1,281,949	-		MMP_RS06675	0.53	-0.1