Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06460

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,238,804	+				-2.0
1,238,932	+				-1.9
1,239,408	-				-2.4
1,239,702	-				+0.1
1,239,714	+				+0.1
1,239,741	-				-0.0
1,239,742	+				-0.3
1,239,746	-				-0.0
1,239,797	-				+0.6
1,239,798	+				+0.2
1,239,910	-		MMP_RS06460	0.26	+0.2
1,240,029	-		MMP_RS06460	0.49	+0.8
1,240,036	+		MMP_RS06460	0.51	-0.0
1,240,075	-		MMP_RS06460	0.58	-0.3
1,240,115	-		MMP_RS06460	0.66	+0.7
1,240,179	-		MMP_RS06460	0.79	+0.4
1,240,187	+		MMP_RS06460	0.81	+0.3
1,240,311	-				+0.5
1,240,312	+				+0.5
1,240,321	-				+0.0
1,240,322	+				+0.2
1,240,423	-		MMP_RS06465	0.20	+0.3
1,240,423	-		MMP_RS06465	0.20	+0.2
1,240,456	-		MMP_RS06465	0.25	+0.1
1,240,457	+		MMP_RS06465	0.25	+0.4
1,240,466	-		MMP_RS06465	0.27	+0.1
1,240,509	-		MMP_RS06465	0.33	+0.7
1,240,510	+		MMP_RS06465	0.33	+0.3
1,240,511	-		MMP_RS06465	0.33	-0.1
1,240,519	-		MMP_RS06465	0.35	+0.3
1,240,548	-		MMP_RS06465	0.39	+0.0
1,240,551	-		MMP_RS06465	0.39	+0.5
1,240,552	+		MMP_RS06465	0.39	-0.1
1,240,582	+		MMP_RS06465	0.44	+0.6
1,240,582	+		MMP_RS06465	0.44	-0.1
1,240,587	-		MMP_RS06465	0.45	+0.2
1,240,594	-		MMP_RS06465	0.46	-0.3
1,240,597	-		MMP_RS06465	0.46	-0.3
1,240,597	-		MMP_RS06465	0.46	+0.2
1,240,598	+		MMP_RS06465	0.46	-0.2
1,240,621	-		MMP_RS06465	0.50	+0.3
1,240,660	+		MMP_RS06465	0.55	-2.1
1,240,660	+		MMP_RS06465	0.55	+0.0
1,240,661	-		MMP_RS06465	0.55	+0.6
1,240,662	+		MMP_RS06465	0.56	-0.5
1,240,731	-		MMP_RS06465	0.66	-0.3
1,240,732	+		MMP_RS06465	0.66	+0.3
1,240,740	-		MMP_RS06465	0.67	+0.3
1,240,907	+				+0.4
1,240,933	+				-0.4
1,240,933	+				-0.8
1,240,983	+				-0.1
1,240,993	+				-0.2
1,241,021	+				-0.3
1,241,050	-				-0.8