Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06230

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,196,404	+		MMP_RS06225	0.28	+0.2
1,196,404	+		MMP_RS06225	0.28	-2.2
1,196,415	+		MMP_RS06225	0.29	+0.2
1,196,497	-		MMP_RS06225	0.37	+0.2
1,196,525	-		MMP_RS06225	0.40	+0.3
1,196,562	-		MMP_RS06225	0.43	-0.1
1,196,711	+		MMP_RS06225	0.57	-0.7
1,196,823	+		MMP_RS06225	0.68	+0.2
1,196,981	-		MMP_RS06225	0.82	-0.6
1,196,998	-		MMP_RS06225	0.84	+0.1
1,197,166	+				+0.2
1,197,170	-				-0.2
1,197,319	-				-0.8
1,197,499	+		MMP_RS06230	0.28	-0.6
1,197,502	-		MMP_RS06230	0.29	-1.2
1,197,502	-		MMP_RS06230	0.29	-3.6
1,197,504	-		MMP_RS06230	0.29	-0.3
1,197,505	+		MMP_RS06230	0.29	-1.2
1,197,543	+		MMP_RS06230	0.35	-0.1
1,197,764	+		MMP_RS06230	0.67	+0.2
1,197,928	-				-2.0
1,197,935	-				-0.9
1,198,075	+				-3.6
1,198,458	+				-1.4