Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05875

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,127,212	+				-0.2
1,127,215	-				+0.0
1,127,220	+				+0.1
1,127,258	-				-0.1
1,127,269	+				+0.3
1,127,316	+				+0.9
1,127,342	-				+0.0
1,127,438	-				+0.3
1,127,875	-				+0.1
1,127,875	-				+0.4
1,127,876	+				+0.7
1,127,876	+				+0.8
1,127,929	-				+0.5
1,127,930	+				+0.5
1,127,932	+				-0.1
1,127,933	-				-0.1
1,127,934	+				-0.1
1,127,952	-				-0.0
1,128,015	-				-0.6
1,128,015	-				-1.2
1,128,015	-				-0.5
1,128,015	-				-1.0
1,128,018	+				+0.2
1,128,018	+				-0.5
1,128,030	+				-0.5
1,128,040	+				-0.6
1,128,074	-				-4.4
1,128,075	+				-2.3
1,128,134	+				-0.5
1,128,140	-				-2.9
1,128,477	+		MMP_RS05875	0.52	-1.6
1,128,490	-		MMP_RS05875	0.53	-2.6
1,128,578	-		MMP_RS05875	0.64	-1.9
1,128,579	+		MMP_RS05875	0.64	-1.5
1,128,658	+		MMP_RS05875	0.74	-1.7
1,129,275	-				-2.3
1,129,470	-				-1.2
1,129,514	+				-0.0
1,129,600	+				+0.3
1,129,606	-				-0.3
1,129,607	+				-0.3
1,129,660	-				-0.6