Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05290

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,011,243	-		MMP_RS05285	0.22	-1.1
1,011,328	+		MMP_RS05285	0.29	+0.5
1,011,460	-		MMP_RS05285	0.40	+0.5
1,011,469	+		MMP_RS05285	0.41	+0.1
1,011,670	-		MMP_RS05285	0.58	+0.3
1,011,747	-		MMP_RS05285	0.65	-0.2
1,011,784	-		MMP_RS05285	0.68	+0.1
1,011,784	-		MMP_RS05285	0.68	+0.3
1,011,785	+		MMP_RS05285	0.68	+0.0
1,011,828	+		MMP_RS05285	0.72	+0.2
1,011,944	-		MMP_RS05285	0.82	+0.4
1,012,174	+				-0.2
1,012,197	-				+0.3
1,012,217	-				-0.6
1,012,226	-				+0.5
1,012,280	+				+0.1
1,012,280	+				+0.8
1,012,280	+				+0.3
1,012,280	+				-0.0
1,012,462	-		MMP_RS05290	0.37	+0.1
1,012,462	-		MMP_RS05290	0.37	+0.2
1,012,499	-		MMP_RS05290	0.43	+0.2
1,012,500	+		MMP_RS05290	0.43	+0.0
1,012,500	+		MMP_RS05290	0.43	+0.0
1,012,505	+		MMP_RS05290	0.44	+0.1
1,012,538	+		MMP_RS05290	0.49	+0.3
1,012,551	+		MMP_RS05290	0.51	+0.3
1,012,581	+		MMP_RS05290	0.56	+1.0
1,012,583	-		MMP_RS05290	0.57	+0.1
1,012,622	-		MMP_RS05290	0.63	-0.1
1,012,622	-		MMP_RS05290	0.63	-1.0
1,012,708	-		MMP_RS05290	0.77	+0.0
1,012,715	+		MMP_RS05290	0.79	+0.5
1,012,745	+		MMP_RS05290	0.84	-0.1
1,012,769	-		MMP_RS05290	0.88	-0.1
1,012,786	+				+0.1
1,012,837	-				-0.3
1,012,837	-				+0.3
1,012,838	+				-0.3
1,012,847	+				+0.2
1,012,851	-				+0.4
1,012,851	-				+0.2
1,012,851	-				-0.3
1,012,865	-				-0.2
1,012,866	+				+0.4
1,012,874	-				+0.8
1,012,874	-				+0.6
1,012,874	-				+0.3
1,012,888	-				+0.4
1,012,892	-				+0.0
1,012,900	-				-0.3
1,012,900	-				+0.3
1,012,940	+				+0.0
1,012,961	-				+1.0
1,012,962	+				+0.7
1,012,966	-				+0.1
1,012,966	-				+0.1
1,012,967	+				+0.3
1,012,971	-				+0.0
1,012,992	+				-1.2
1,013,189	-		MMP_RS05295	0.11	-0.6
1,013,190	+		MMP_RS05295	0.11	-0.0
1,013,218	+		MMP_RS05295	0.12	+0.1
1,013,246	-		MMP_RS05295	0.14	-0.1
1,013,246	-		MMP_RS05295	0.14	+0.3
1,013,337	+		MMP_RS05295	0.18	+0.6
1,013,499	-		MMP_RS05295	0.26	-0.0
1,013,522	-		MMP_RS05295	0.27	+0.0
1,013,534	+		MMP_RS05295	0.27	-0.3
1,013,838	+		MMP_RS05295	0.41	+0.0