Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05265

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,005,018	-				-2.8
1,005,043	+				+0.2
1,005,168	-				-0.7
1,005,169	+				-1.9
1,005,261	+				-0.9
1,005,725	-				-2.2
1,005,832	+				-2.1
1,005,835	+				+0.4
1,005,873	+				-0.6
1,005,927	+				-0.6
1,005,932	-				-0.3
1,005,972	-				-1.1
1,006,010	-				-0.9
1,006,392	+		MMP_RS05265	0.30	-0.1
1,006,413	+		MMP_RS05265	0.31	-1.6
1,006,480	+		MMP_RS05265	0.36	-0.5
1,006,673	+		MMP_RS05265	0.49	-0.6
1,006,735	-		MMP_RS05265	0.53	-2.1
1,007,221	+		MMP_RS05265	0.86	-1.6
1,007,478	-				+0.0
1,007,479	+				+0.3
1,007,479	+				-0.1
1,007,479	+				+0.4
1,007,479	+				+0.8
1,007,479	+				+0.6
1,007,480	-				-0.0
1,007,480	-				+0.3
1,007,480	-				+0.3
1,007,481	+				+0.4
1,007,481	+				-0.3
1,007,493	-				-0.2
1,007,533	-				+0.5
1,007,533	-				+0.0
1,007,533	-				-0.0
1,007,667	+		MMP_RS05270	0.21	+0.9
1,007,668	-		MMP_RS05270	0.21	+0.2
1,007,668	-		MMP_RS05270	0.21	-0.0
1,007,669	+		MMP_RS05270	0.21	-0.6
1,007,671	-		MMP_RS05270	0.22	-0.8
1,007,702	+		MMP_RS05270	0.26	+0.3
1,007,705	+		MMP_RS05270	0.26	+0.4
1,007,706	-		MMP_RS05270	0.26	+0.2
1,007,757	-		MMP_RS05270	0.32	-0.0
1,007,896	-		MMP_RS05270	0.50	+0.1
1,007,897	+		MMP_RS05270	0.50	+0.6
1,007,901	+		MMP_RS05270	0.51	+0.2
1,007,905	+		MMP_RS05270	0.51	+0.3
1,007,907	-		MMP_RS05270	0.51	+0.1
1,007,928	+		MMP_RS05270	0.54	+0.3
1,007,932	-		MMP_RS05270	0.54	-0.2
1,007,933	+		MMP_RS05270	0.55	-0.4
1,007,934	-		MMP_RS05270	0.55	+0.1
1,007,961	-		MMP_RS05270	0.58	-0.7
1,007,961	-		MMP_RS05270	0.58	+0.1
1,007,961	-		MMP_RS05270	0.58	-0.2
1,007,962	+		MMP_RS05270	0.58	-0.3
1,007,962	+		MMP_RS05270	0.58	-0.3
1,007,963	-		MMP_RS05270	0.58	+0.5
1,007,963	-		MMP_RS05270	0.58	+0.0
1,007,963	-		MMP_RS05270	0.58	-0.0
1,007,964	+		MMP_RS05270	0.58	+0.5
1,007,979	+		MMP_RS05270	0.60	+0.0
1,008,079	+		MMP_RS05270	0.73	+0.2
1,008,096	+		MMP_RS05270	0.75	-0.2
1,008,148	-		MMP_RS05270	0.81	-0.1
1,008,150	-		MMP_RS05270	0.82	-0.2
1,008,155	+		MMP_RS05270	0.82	+0.4
1,008,167	+		MMP_RS05270	0.84	+0.4
1,008,217	-				-0.0
1,008,259	+				-0.1
1,008,302	-				+0.7
1,008,347	-				+0.2