Strain Fitness in Methanococcus maripaludis S2 around MMP_RS01120

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
209,293	+				+0.2
209,377	-				+0.2
209,380	-				+0.5
209,384	+				+0.1
209,386	-				+0.1
209,388	-				-0.3
209,388	-				-0.3
209,388	-				+0.3
209,388	-				+0.7
209,389	+				+0.3
209,393	+				-0.2
209,393	+				+0.3
209,393	+				+0.0
209,519	-				-0.2
209,549	-				+0.1
209,549	-				+0.2
209,550	+				+0.1
209,555	-				-0.4
209,560	+				+0.3
209,573	-				-0.3
209,643	-				+0.4
209,644	+				-0.2
209,645	-				+0.3
209,645	-				-0.3
209,646	+				-0.2
209,646	+				+0.1
209,646	+				+0.1
209,656	-				+0.3
209,656	-				-0.2
209,658	-				+0.0
209,659	+				+0.0
209,670	-				-0.0
209,678	-				-0.3
209,678	-				+0.3
209,688	+				-0.1
209,689	-				+0.1
209,689	-				+0.0
209,689	-				+0.3
209,690	+				-0.2
209,691	-				-0.1
209,691	-				+0.2
209,691	-				-0.1
209,692	+				-0.1
209,692	+				-0.1
209,705	+				-0.0
209,746	+				+0.7
209,773	-				+0.1
209,776	-				-0.1
209,791	+				+0.6
209,801	-				+0.2
209,820	+				+0.7
209,840	-				+0.1
209,841	+				+0.3
209,947	-				+0.2
209,947	-				+0.2
209,955	-				+0.4
209,959	-				+0.1
209,959	-				+0.2
209,959	-				-0.1
210,003	+				+0.5
210,010	-				-0.0
210,010	-				+0.2
210,010	-				-0.3
210,010	-				+0.5
210,011	+				+0.0
210,012	-				-0.0
210,012	-				+0.2
210,012	-				+0.2
210,013	+				+0.2
210,013	+				+0.1
210,013	+				-0.3
210,013	+				-0.1
210,013	+				+0.5
210,014	-				+0.1
210,055	-				+0.4
210,055	-				+0.7
210,055	-				+0.3
210,055	-				-0.2
210,057	-				+0.4
210,057	-				+0.5
210,062	-				+0.3
210,062	-				-0.2
210,066	-				+0.2
210,066	-				+0.2
210,066	-				-0.1
210,067	+				+0.6
210,067	+				+0.2
210,123	-				-0.1
210,188	+				-0.3
210,201	-				+0.0
210,202	+				-0.2
210,290	-		MMP_RS01120	0.13	+0.3
210,309	+		MMP_RS01120	0.15	-0.2
210,309	+		MMP_RS01120	0.15	+0.6
210,309	+		MMP_RS01120	0.15	+0.3
210,322	-		MMP_RS01120	0.16	+0.0
210,327	-		MMP_RS01120	0.17	-0.1
210,328	+		MMP_RS01120	0.17	+0.0
210,334	-		MMP_RS01120	0.17	+0.5
210,407	-		MMP_RS01120	0.25	+0.1
210,624	-		MMP_RS01120	0.48	+0.5
210,664	-		MMP_RS01120	0.52	+1.9
210,669	+		MMP_RS01120	0.52	-0.4
211,030	+				-0.0
211,184	-				+0.4
211,217	+		MMP_RS01125	0.21	-0.2
211,253	-		MMP_RS01125	0.36	-0.2
211,254	+		MMP_RS01125	0.37	+0.2
211,300	-		MMP_RS01125	0.56	-0.1
211,300	-		MMP_RS01125	0.56	+0.2
211,300	-		MMP_RS01125	0.56	+0.2
211,301	+		MMP_RS01125	0.57	-0.0
211,301	+		MMP_RS01125	0.57	+0.3
211,305	+		MMP_RS01125	0.59	-0.1
211,325	-		MMP_RS01125	0.67	+0.3
211,416	+				+0.7
211,429	-				-0.0
211,429	-				-0.0
211,455	-				-0.6
211,455	-				+0.1
211,456	+				+0.0
211,456	+				+0.4
211,457	-				+0.2
211,457	-				+0.1
211,458	+				-0.2
211,458	+				+0.2
211,458	+				+0.0
211,458	+				+0.3
211,496	-				+0.1
211,497	+				+0.3
211,500	-				-0.3
211,678	-		MMP_RS01130	0.39	-0.3
211,678	-		MMP_RS01130	0.39	+0.3
211,746	-		MMP_RS01130	0.52	-0.1
211,747	+		MMP_RS01130	0.52	+0.3
211,770	-		MMP_RS01130	0.56	+0.3
211,773	+		MMP_RS01130	0.57	+0.1
211,806	-		MMP_RS01130	0.63	+0.5
211,807	+		MMP_RS01130	0.63	+0.2
211,880	-		MMP_RS01130	0.77	+0.6
212,008	-				+0.9
212,008	-				-0.0
212,009	+				-0.7
212,012	-				-0.2
212,013	+				+0.7
212,017	+				-0.1
212,018	-				+0.2