Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00140

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
29,417	-				+0.2
29,417	-				-0.2
29,418	+				-0.1
29,453	+				-0.8
29,459	-				-0.3
29,516	+				-0.1
29,746	+		MMP_RS00135	0.25	+0.5
29,770	+		MMP_RS00135	0.27	-0.1
29,770	+		MMP_RS00135	0.27	-0.2
29,807	-		MMP_RS00135	0.32	+0.2
29,807	-		MMP_RS00135	0.32	+0.4
30,051	+		MMP_RS00135	0.59	+0.3
30,051	+		MMP_RS00135	0.59	-0.0
30,231	-		MMP_RS00135	0.80	-0.3
30,253	-		MMP_RS00135	0.82	-0.6
30,262	+		MMP_RS00135	0.83	-0.9
30,262	+		MMP_RS00135	0.83	-0.6
30,479	-		MMP_RS00140	0.20	+0.3
30,489	-		MMP_RS00140	0.23	-0.3
30,520	+		MMP_RS00140	0.32	+0.4
30,534	+		MMP_RS00140	0.37	+0.3
30,571	+		MMP_RS00140	0.48	+0.8
30,703	+		MMP_RS00140	0.87	+0.0
30,723	-				-0.3
30,780	-				+0.4
30,780	-				+0.0
30,780	-				+0.2
30,841	-		MMP_RS00145	0.12	+0.0
30,890	+		MMP_RS00145	0.18	-0.3
30,926	+		MMP_RS00145	0.22	+0.1
31,128	+		MMP_RS00145	0.47	-0.1
31,278	+		MMP_RS00145	0.65	-0.1
31,319	+		MMP_RS00145	0.70	+0.4
31,319	+		MMP_RS00145	0.70	-0.3
31,337	+		MMP_RS00145	0.72	-0.2
31,372	-		MMP_RS00145	0.76	-0.6
31,377	-		MMP_RS00145	0.77	+0.4
31,378	+		MMP_RS00145	0.77	+0.7
31,378	+		MMP_RS00145	0.77	-0.3
31,382	+		MMP_RS00145	0.77	+0.8
31,451	+		MMP_RS00145	0.86	+0.4
31,498	+				-0.4
31,501	-				+0.5
31,615	+				+0.7
31,615	+				+0.1
31,623	-				-0.1
31,623	-				+0.7
31,624	+				+0.0
31,624	+				+0.4
31,627	-				+0.4
31,632	-				+0.0
31,637	-				-0.1
31,637	-				+0.1
31,637	-				-0.1
31,638	+				+0.1
31,638	+				+0.3
31,638	+				-0.2
31,638	+				-0.2
31,638	+				+0.0
31,639	-				-0.0
31,639	-				+0.1
31,639	-				-0.3
31,639	-				+0.1
31,639	-				-0.1
31,640	+				+0.0
31,640	+				+0.1
31,641	-				-0.4
31,642	+				+0.2
31,642	+				+0.3
31,642	+				+0.5
31,643	-				-0.1
31,644	+				-0.0
31,658	+				+0.2
31,667	-				-0.2
31,667	-				+0.2
31,667	-				-0.1
31,667	-				-0.1
31,667	-				+0.5
31,667	-				+0.2
31,667	-				+0.1
31,668	+				+0.0
31,668	+				+0.1
31,668	+				+0.1
31,671	-				-0.1
31,671	-				+0.0
31,672	+				-0.5
31,675	-				+0.1
31,675	-				+0.1
31,681	-				-0.5
31,685	-				+1.4
31,729	-				+0.5
31,729	-				-0.1
31,730	+				+0.2
31,730	+				-0.2