Strain Fitness in Dechlorosoma suillum PS around Dsui_3438
Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,692,409 | - | Dsui_3437 | 0.72 | -0.8 | |
3,692,487 | + | +0.6 | |||
3,692,526 | - | Dsui_3437 | 0.76 | +0.1 | |
3,692,545 | - | Dsui_3437 | 0.76 | -0.5 | |
3,692,605 | - | Dsui_3437 | 0.78 | -1.1 | |
3,692,669 | - | Dsui_3437 | 0.81 | -0.1 | |
3,692,700 | - | Dsui_3437 | 0.82 | -0.7 | |
3,692,736 | + | +0.6 | |||
3,692,807 | - | Dsui_3437 | 0.85 | -0.1 | |
3,692,870 | - | Dsui_3437 | 0.87 | -0.4 | |
3,692,883 | - | Dsui_3437 | 0.88 | +0.1 | |
3,693,188 | - | +0.1 | |||
3,693,411 | + | -1.4 | |||
3,693,541 | + | Dsui_3438 | 0.30 | -2.0 | |
3,693,549 | - | Dsui_3438 | 0.31 | -0.2 | |
3,693,618 | + | +0.6 | |||
3,693,883 | - | Dsui_3438 | 0.68 | -0.4 | |
3,693,943 | + | Dsui_3438 | 0.75 | +0.6 | |
3,693,981 | + | Dsui_3438 | 0.79 | -0.4 | |
3,694,106 | + | +0.6 | |||
3,694,124 | - | -0.3 | |||
3,694,151 | - | -0.3 | |||
3,694,409 | + | -1.4 | |||
3,694,504 | + | Dsui_3439 | 0.11 | -0.4 | |
3,694,523 | - | Dsui_3439 | 0.13 | -1.2 | |
3,694,540 | + | Dsui_3439 | 0.14 | -0.4 | |
3,694,853 | - | Dsui_3439 | 0.33 | -0.5 | |
3,694,969 | + | -0.4 | |||
3,695,060 | - | Dsui_3439 | 0.45 | -1.5 | |
3,695,086 | + | Dsui_3439 | 0.47 | -1.0 | |
3,695,094 | - | Dsui_3439 | 0.47 | -0.3 | |
3,695,119 | + | -0.4 | |||
3,695,160 | - | Dsui_3439 | 0.51 | -1.2 |
Or see this region's nucleotide sequence