Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3364 and Dsui_3365 are separated by 251 nucleotides Dsui_3365 and Dsui_3366 are separated by 120 nucleotides Dsui_3366 and Dsui_3367 are separated by 8 nucleotides
Dsui_3364: Dsui_3364 - alanine--tRNA ligase, at 3,603,585 to 3,606,278
_3364
Dsui_3365: Dsui_3365 - hypothetical protein, at 3,606,530 to 3,606,913
_3365
Dsui_3366: Dsui_3366 - glycerophosphoryl diester phosphodiesterase, at 3,607,034 to 3,607,840
_3366
Dsui_3367: Dsui_3367 - ABC-type sugar transport system, periplasmic component, at 3,607,849 to 3,609,213
_3367
Position (kb)
3607
3608 Strain fitness (log2 ratio)
-2
-1
0
1 at 3606.362 kb on - strand at 3606.402 kb on + strand at 3606.656 kb on + strand at 3606.702 kb on + strand at 3606.736 kb on - strand at 3606.737 kb on - strand, within Dsui_3365 at 3606.810 kb on - strand at 3606.837 kb on - strand at 3606.866 kb on - strand, within Dsui_3365 at 3606.866 kb on - strand at 3606.966 kb on - strand at 3607.017 kb on - strand at 3607.141 kb on - strand, within Dsui_3366 at 3607.141 kb on - strand, within Dsui_3366 at 3607.187 kb on - strand, within Dsui_3366 at 3607.286 kb on + strand at 3607.458 kb on - strand, within Dsui_3366 at 3607.462 kb on + strand at 3607.488 kb on - strand, within Dsui_3366 at 3607.531 kb on + strand at 3607.554 kb on - strand, within Dsui_3366 at 3607.609 kb on + strand at 3607.855 kb on - strand at 3607.944 kb on - strand at 3607.949 kb on - strand at 3607.967 kb on + strand at 3607.972 kb on + strand at 3608.097 kb on + strand at 3608.236 kb on - strand, within Dsui_3367 at 3608.275 kb on - strand, within Dsui_3367 at 3608.452 kb on - strand, within Dsui_3367 at 3608.497 kb on + strand at 3608.500 kb on - strand, within Dsui_3367 at 3608.505 kb on - strand, within Dsui_3367 at 3608.569 kb on - strand, within Dsui_3367 at 3608.684 kb on - strand, within Dsui_3367 at 3608.743 kb on - strand, within Dsui_3367 at 3608.775 kb on - strand, within Dsui_3367
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 3,606,362 - -1.0 3,606,402 + -2.0 3,606,656 + +0.6 3,606,702 + +0.6 3,606,736 - +0.6 3,606,737 - Dsui_3365 0.54 -2.2 3,606,810 - +0.6 3,606,837 - +0.6 3,606,866 - Dsui_3365 0.88 -0.4 3,606,866 - -0.4 3,606,966 - +0.6 3,607,017 - -0.4 3,607,141 - Dsui_3366 0.13 -1.0 3,607,141 - Dsui_3366 0.13 -0.4 3,607,187 - Dsui_3366 0.19 +0.6 3,607,286 + +0.6 3,607,458 - Dsui_3366 0.53 -1.7 3,607,462 + +0.6 3,607,488 - Dsui_3366 0.56 -1.4 3,607,531 + +0.6 3,607,554 - Dsui_3366 0.64 -1.7 3,607,609 + -1.0 3,607,855 - -0.5 3,607,944 - +0.8 3,607,949 - -0.7 3,607,967 + +0.6 3,607,972 + -0.4 3,608,097 + -0.4 3,608,236 - Dsui_3367 0.28 -1.0 3,608,275 - Dsui_3367 0.31 -0.3 3,608,452 - Dsui_3367 0.44 -0.7 3,608,497 + -1.0 3,608,500 - Dsui_3367 0.48 -1.7 3,608,505 - Dsui_3367 0.48 +0.5 3,608,569 - Dsui_3367 0.53 -0.7 3,608,684 - Dsui_3367 0.61 -0.2 3,608,743 - Dsui_3367 0.65 -0.1 3,608,775 - Dsui_3367 0.68 -0.8
Or see this region's nucleotide sequence