Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3241 and Dsui_3242 overlap by 17 nucleotides Dsui_3242 and Dsui_3243 are separated by 21 nucleotides Dsui_3243 and Dsui_3244 are separated by 22 nucleotides Dsui_3244 and Dsui_3245 are separated by 66 nucleotides
Dsui_3241: Dsui_3241 - NTP pyrophosphohydrolase, at 3,485,186 to 3,485,812
_3241
Dsui_3242: Dsui_3242 - hypothetical protein, at 3,485,796 to 3,486,056
_3242
Dsui_3243: Dsui_3243 - clan AA aspartic protease, TIGR02281 family, at 3,486,078 to 3,486,728
_3243
Dsui_3244: Dsui_3244 - GMP synthase family protein, at 3,486,751 to 3,487,461
_3244
Dsui_3245: Dsui_3245 - hypothetical protein, at 3,487,528 to 3,488,022
_3245
Position (kb)
3486
3487 Strain fitness (log2 ratio)
-2
-1
0
1 at 3485.118 kb on + strand at 3485.168 kb on - strand at 3485.206 kb on + strand at 3485.276 kb on - strand, within Dsui_3241 at 3485.276 kb on - strand, within Dsui_3241 at 3485.276 kb on - strand, within Dsui_3241 at 3485.276 kb on - strand, within Dsui_3241 at 3485.351 kb on + strand, within Dsui_3241 at 3485.359 kb on - strand, within Dsui_3241 at 3485.397 kb on - strand, within Dsui_3241 at 3485.401 kb on + strand, within Dsui_3241 at 3485.428 kb on + strand, within Dsui_3241 at 3485.502 kb on - strand, within Dsui_3241 at 3485.578 kb on + strand, within Dsui_3241 at 3485.611 kb on + strand at 3485.619 kb on - strand, within Dsui_3241 at 3485.619 kb on - strand, within Dsui_3241 at 3485.619 kb on - strand, within Dsui_3241 at 3485.643 kb on + strand, within Dsui_3241 at 3485.776 kb on + strand at 3485.840 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3486.006 kb on - strand, within Dsui_3242 at 3486.006 kb on - strand, within Dsui_3242 at 3486.008 kb on + strand, within Dsui_3242 at 3486.027 kb on - strand, within Dsui_3242 at 3486.073 kb on - strand at 3486.073 kb on - strand at 3486.097 kb on + strand at 3486.105 kb on - strand at 3486.163 kb on - strand, within Dsui_3243 at 3486.174 kb on + strand, within Dsui_3243 at 3486.182 kb on - strand, within Dsui_3243 at 3486.236 kb on - strand, within Dsui_3243 at 3486.246 kb on - strand, within Dsui_3243 at 3486.300 kb on - strand, within Dsui_3243 at 3486.349 kb on - strand, within Dsui_3243 at 3486.431 kb on + strand, within Dsui_3243 at 3486.431 kb on + strand, within Dsui_3243 at 3486.437 kb on + strand, within Dsui_3243 at 3486.439 kb on - strand, within Dsui_3243 at 3486.445 kb on - strand, within Dsui_3243 at 3486.445 kb on - strand, within Dsui_3243 at 3486.474 kb on + strand, within Dsui_3243 at 3486.493 kb on - strand, within Dsui_3243 at 3486.539 kb on - strand, within Dsui_3243 at 3486.555 kb on + strand, within Dsui_3243 at 3486.578 kb on + strand, within Dsui_3243 at 3486.614 kb on + strand, within Dsui_3243 at 3486.696 kb on - strand at 3486.707 kb on + strand at 3486.710 kb on - strand at 3486.833 kb on + strand, within Dsui_3244 at 3486.841 kb on - strand, within Dsui_3244 at 3486.841 kb on - strand, within Dsui_3244 at 3486.841 kb on - strand, within Dsui_3244 at 3486.841 kb on - strand, within Dsui_3244 at 3486.841 kb on - strand, within Dsui_3244 at 3486.910 kb on - strand, within Dsui_3244 at 3486.939 kb on + strand, within Dsui_3244 at 3486.949 kb on + strand, within Dsui_3244 at 3486.956 kb on + strand, within Dsui_3244 at 3486.956 kb on + strand, within Dsui_3244 at 3486.956 kb on + strand, within Dsui_3244 at 3486.956 kb on + strand, within Dsui_3244 at 3486.964 kb on - strand, within Dsui_3244 at 3487.036 kb on + strand, within Dsui_3244 at 3487.092 kb on - strand, within Dsui_3244 at 3487.094 kb on + strand, within Dsui_3244 at 3487.094 kb on + strand, within Dsui_3244 at 3487.102 kb on - strand, within Dsui_3244 at 3487.132 kb on - strand, within Dsui_3244 at 3487.177 kb on - strand, within Dsui_3244 at 3487.188 kb on + strand, within Dsui_3244 at 3487.196 kb on - strand, within Dsui_3244 at 3487.251 kb on + strand, within Dsui_3244 at 3487.252 kb on + strand, within Dsui_3244 at 3487.371 kb on - strand, within Dsui_3244 at 3487.464 kb on + strand at 3487.592 kb on - strand, within Dsui_3245
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 3,485,118 + -0.4 3,485,168 - -0.3 3,485,206 + -0.4 3,485,276 - Dsui_3241 0.14 -0.5 3,485,276 - Dsui_3241 0.14 -0.5 3,485,276 - Dsui_3241 0.14 +0.1 3,485,276 - Dsui_3241 0.14 -0.5 3,485,351 + Dsui_3241 0.26 -1.9 3,485,359 - Dsui_3241 0.28 +0.2 3,485,397 - Dsui_3241 0.34 -0.3 3,485,401 + Dsui_3241 0.34 -0.4 3,485,428 + Dsui_3241 0.39 -2.4 3,485,502 - Dsui_3241 0.50 +0.3 3,485,578 + Dsui_3241 0.63 +0.6 3,485,611 + +0.6 3,485,619 - Dsui_3241 0.69 +0.2 3,485,619 - Dsui_3241 0.69 -0.2 3,485,619 - Dsui_3241 0.69 -0.4 3,485,643 + Dsui_3241 0.73 -2.5 3,485,776 + -1.0 3,485,840 + Dsui_3242 0.17 +0.6 3,485,998 + Dsui_3242 0.77 +0.6 3,485,998 + Dsui_3242 0.77 +0.6 3,485,998 + Dsui_3242 0.77 -0.4 3,485,998 + Dsui_3242 0.77 +0.6 3,486,006 - Dsui_3242 0.80 -0.1 3,486,006 - Dsui_3242 0.80 -0.3 3,486,008 + Dsui_3242 0.81 +0.6 3,486,027 - Dsui_3242 0.89 -0.5 3,486,073 - +0.1 3,486,073 - -0.1 3,486,097 + +0.6 3,486,105 - -0.4 3,486,163 - Dsui_3243 0.13 -0.5 3,486,174 + Dsui_3243 0.15 -0.9 3,486,182 - Dsui_3243 0.16 -0.4 3,486,236 - Dsui_3243 0.24 -0.2 3,486,246 - Dsui_3243 0.26 -0.6 3,486,300 - Dsui_3243 0.34 -0.3 3,486,349 - Dsui_3243 0.42 -0.2 3,486,431 + Dsui_3243 0.54 -0.4 3,486,431 + Dsui_3243 0.54 -1.9 3,486,437 + Dsui_3243 0.55 +0.6 3,486,439 - Dsui_3243 0.55 -0.3 3,486,445 - Dsui_3243 0.56 -0.3 3,486,445 - Dsui_3243 0.56 -0.2 3,486,474 + Dsui_3243 0.61 -1.4 3,486,493 - Dsui_3243 0.64 +0.0 3,486,539 - Dsui_3243 0.71 -0.6 3,486,555 + Dsui_3243 0.73 -0.4 3,486,578 + Dsui_3243 0.77 +0.6 3,486,614 + Dsui_3243 0.82 -0.4 3,486,696 - +0.9 3,486,707 + -0.4 3,486,710 - -0.3 3,486,833 + Dsui_3244 0.12 -1.7 3,486,841 - Dsui_3244 0.13 -1.4 3,486,841 - Dsui_3244 0.13 -0.4 3,486,841 - Dsui_3244 0.13 +0.6 3,486,841 - Dsui_3244 0.13 -1.0 3,486,841 - Dsui_3244 0.13 +0.6 3,486,910 - Dsui_3244 0.22 -0.4 3,486,939 + Dsui_3244 0.26 -0.1 3,486,949 + Dsui_3244 0.28 -2.4 3,486,956 + Dsui_3244 0.29 +0.6 3,486,956 + Dsui_3244 0.29 -0.4 3,486,956 + Dsui_3244 0.29 -2.4 3,486,956 + Dsui_3244 0.29 -1.5 3,486,964 - Dsui_3244 0.30 +0.6 3,487,036 + Dsui_3244 0.40 -0.8 3,487,092 - Dsui_3244 0.48 -1.7 3,487,094 + Dsui_3244 0.48 -0.4 3,487,094 + Dsui_3244 0.48 +0.2 3,487,102 - Dsui_3244 0.49 -2.0 3,487,132 - Dsui_3244 0.54 -1.2 3,487,177 - Dsui_3244 0.60 -1.0 3,487,188 + Dsui_3244 0.61 -1.0 3,487,196 - Dsui_3244 0.63 -2.3 3,487,251 + Dsui_3244 0.70 +0.6 3,487,252 + Dsui_3244 0.70 +0.6 3,487,371 - Dsui_3244 0.87 -0.7 3,487,464 + +0.6 3,487,592 - Dsui_3245 0.13 -0.2
Or see this region's nucleotide sequence