Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3208 and Dsui_3209 are separated by 68 nucleotides Dsui_3209 and Dsui_3210 are separated by 10 nucleotides Dsui_3210 and Dsui_3211 are separated by 241 nucleotides
Dsui_3208: Dsui_3208 - cysteine synthase A, at 3,443,001 to 3,443,933
_3208
Dsui_3209: Dsui_3209 - putative esterase of the alpha/beta hydrolase fold protein, at 3,444,002 to 3,444,538
_3209
Dsui_3210: Dsui_3210 - hypothetical protein, at 3,444,549 to 3,445,031
_3210
Dsui_3211: Dsui_3211 - glutamate dehydrogenase/leucine dehydrogenase, at 3,445,273 to 3,446,619
_3211
Position (kb)
3444
3445
3446 Strain fitness (log2 ratio)
-2
-1
0
1 at 3443.658 kb on + strand, within Dsui_3208 at 3443.678 kb on - strand, within Dsui_3208 at 3443.791 kb on - strand at 3443.810 kb on + strand, within Dsui_3208 at 3443.869 kb on - strand at 3443.908 kb on - strand at 3443.951 kb on - strand at 3444.101 kb on - strand at 3444.138 kb on - strand, within Dsui_3209 at 3444.138 kb on - strand, within Dsui_3209 at 3444.148 kb on - strand, within Dsui_3209 at 3444.161 kb on - strand at 3444.291 kb on - strand, within Dsui_3209 at 3444.304 kb on - strand, within Dsui_3209 at 3444.347 kb on + strand, within Dsui_3209 at 3444.365 kb on - strand at 3444.433 kb on + strand, within Dsui_3209 at 3444.469 kb on + strand, within Dsui_3209 at 3444.477 kb on - strand at 3444.525 kb on + strand at 3444.654 kb on - strand, within Dsui_3210 at 3444.717 kb on + strand, within Dsui_3210 at 3444.773 kb on - strand, within Dsui_3210 at 3444.836 kb on + strand, within Dsui_3210 at 3444.894 kb on + strand, within Dsui_3210 at 3444.987 kb on - strand at 3445.009 kb on + strand at 3445.029 kb on + strand at 3445.057 kb on + strand at 3445.124 kb on - strand at 3445.159 kb on - strand at 3445.185 kb on + strand at 3445.211 kb on - strand at 3445.319 kb on - strand at 3445.360 kb on - strand at 3445.466 kb on + strand, within Dsui_3211 at 3445.474 kb on - strand, within Dsui_3211 at 3445.485 kb on + strand, within Dsui_3211 at 3445.493 kb on - strand, within Dsui_3211 at 3445.493 kb on - strand, within Dsui_3211 at 3445.536 kb on + strand, within Dsui_3211 at 3445.632 kb on + strand, within Dsui_3211 at 3445.674 kb on + strand, within Dsui_3211 at 3445.674 kb on + strand, within Dsui_3211 at 3445.682 kb on - strand, within Dsui_3211 at 3445.797 kb on - strand at 3445.889 kb on - strand at 3445.983 kb on - strand, within Dsui_3211
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 3,443,658 + Dsui_3208 0.70 +0.0 3,443,678 - Dsui_3208 0.73 -0.3 3,443,791 - -0.3 3,443,810 + Dsui_3208 0.87 -0.8 3,443,869 - +0.7 3,443,908 - -1.3 3,443,951 - -1.3 3,444,101 - -0.3 3,444,138 - Dsui_3209 0.25 +0.7 3,444,138 - Dsui_3209 0.25 -0.9 3,444,148 - Dsui_3209 0.27 -0.3 3,444,161 - +0.7 3,444,291 - Dsui_3209 0.54 +0.7 3,444,304 - Dsui_3209 0.56 +0.7 3,444,347 + Dsui_3209 0.64 -0.2 3,444,365 - -0.3 3,444,433 + Dsui_3209 0.80 -0.7 3,444,469 + Dsui_3209 0.87 +0.6 3,444,477 - +0.7 3,444,525 + -0.3 3,444,654 - Dsui_3210 0.22 -0.3 3,444,717 + Dsui_3210 0.35 -1.0 3,444,773 - Dsui_3210 0.46 -1.7 3,444,836 + Dsui_3210 0.59 -0.3 3,444,894 + Dsui_3210 0.71 -0.3 3,444,987 - -0.3 3,445,009 + -0.9 3,445,029 + +0.7 3,445,057 + -0.9 3,445,124 - -1.3 3,445,159 - +0.7 3,445,185 + -0.9 3,445,211 - -1.9 3,445,319 - +0.7 3,445,360 - -1.7 3,445,466 + Dsui_3211 0.14 +0.1 3,445,474 - Dsui_3211 0.15 -0.9 3,445,485 + Dsui_3211 0.16 -0.4 3,445,493 - Dsui_3211 0.16 -1.7 3,445,493 - Dsui_3211 0.16 -0.3 3,445,536 + Dsui_3211 0.20 -0.4 3,445,632 + Dsui_3211 0.27 +0.1 3,445,674 + Dsui_3211 0.30 -0.2 3,445,674 + Dsui_3211 0.30 +0.3 3,445,682 - Dsui_3211 0.30 +0.7 3,445,797 - +0.7 3,445,889 - +0.7 3,445,983 - Dsui_3211 0.53 -0.3
Or see this region's nucleotide sequence