Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3033 and Dsui_3034 are separated by 372 nucleotides Dsui_3034 and Dsui_3035 are separated by 116 nucleotides
Dsui_3033: Dsui_3033 - acetate kinase, at 3,245,257 to 3,246,450
_3033
Dsui_3034: Dsui_3034 - ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, at 3,246,823 to 3,249,732
_3034
Dsui_3035: Dsui_3035 - diguanylate cyclase (GGDEF) domain-containing protein, at 3,249,849 to 3,251,012
_3035
Position (kb)
3246
3247
3248
3249
3250 Strain fitness (log2 ratio)
-1
0
1 at 3245.874 kb on - strand, within Dsui_3033 at 3245.889 kb on - strand, within Dsui_3033 at 3245.935 kb on + strand, within Dsui_3033 at 3246.241 kb on - strand, within Dsui_3033 at 3246.299 kb on + strand, within Dsui_3033 at 3246.364 kb on + strand at 3246.372 kb on - strand at 3246.428 kb on + strand at 3246.446 kb on - strand at 3246.507 kb on - strand at 3246.558 kb on - strand at 3246.563 kb on - strand at 3246.564 kb on - strand at 3246.570 kb on + strand at 3246.693 kb on - strand at 3247.108 kb on + strand at 3247.111 kb on - strand at 3247.143 kb on + strand, within Dsui_3034 at 3247.167 kb on - strand, within Dsui_3034 at 3247.269 kb on + strand, within Dsui_3034 at 3247.277 kb on - strand, within Dsui_3034 at 3247.277 kb on - strand, within Dsui_3034 at 3247.428 kb on + strand, within Dsui_3034 at 3247.436 kb on - strand, within Dsui_3034 at 3247.436 kb on - strand, within Dsui_3034 at 3247.496 kb on - strand at 3247.588 kb on - strand at 3247.697 kb on + strand, within Dsui_3034 at 3247.705 kb on - strand, within Dsui_3034 at 3247.724 kb on - strand, within Dsui_3034 at 3247.731 kb on + strand, within Dsui_3034 at 3247.787 kb on + strand, within Dsui_3034 at 3247.814 kb on + strand, within Dsui_3034 at 3247.864 kb on + strand, within Dsui_3034 at 3247.989 kb on - strand, within Dsui_3034 at 3247.991 kb on + strand, within Dsui_3034 at 3248.013 kb on + strand, within Dsui_3034 at 3248.063 kb on + strand, within Dsui_3034 at 3248.068 kb on + strand, within Dsui_3034 at 3248.068 kb on - strand, within Dsui_3034 at 3248.123 kb on - strand, within Dsui_3034 at 3248.125 kb on + strand, within Dsui_3034 at 3248.162 kb on + strand, within Dsui_3034 at 3248.200 kb on - strand, within Dsui_3034 at 3248.350 kb on + strand, within Dsui_3034 at 3248.358 kb on - strand, within Dsui_3034 at 3248.387 kb on - strand, within Dsui_3034 at 3248.459 kb on - strand, within Dsui_3034 at 3248.460 kb on + strand, within Dsui_3034 at 3248.475 kb on - strand, within Dsui_3034 at 3248.489 kb on - strand, within Dsui_3034 at 3248.547 kb on + strand, within Dsui_3034 at 3248.644 kb on + strand, within Dsui_3034 at 3248.644 kb on + strand, within Dsui_3034 at 3248.644 kb on + strand, within Dsui_3034 at 3248.652 kb on - strand, within Dsui_3034 at 3248.880 kb on + strand, within Dsui_3034 at 3248.888 kb on - strand, within Dsui_3034 at 3248.909 kb on + strand, within Dsui_3034 at 3248.917 kb on - strand, within Dsui_3034 at 3248.917 kb on - strand at 3249.066 kb on + strand, within Dsui_3034 at 3249.094 kb on + strand, within Dsui_3034 at 3249.102 kb on - strand, within Dsui_3034 at 3249.123 kb on + strand, within Dsui_3034 at 3249.268 kb on - strand, within Dsui_3034 at 3249.293 kb on - strand, within Dsui_3034 at 3249.404 kb on + strand, within Dsui_3034 at 3249.431 kb on + strand, within Dsui_3034 at 3249.439 kb on + strand, within Dsui_3034 at 3249.604 kb on + strand at 3249.728 kb on + strand at 3249.759 kb on + strand at 3249.798 kb on + strand at 3249.806 kb on - strand at 3249.984 kb on - strand, within Dsui_3035 at 3250.014 kb on - strand, within Dsui_3035 at 3250.061 kb on + strand, within Dsui_3035 at 3250.061 kb on + strand, within Dsui_3035 at 3250.120 kb on + strand, within Dsui_3035 at 3250.338 kb on - strand, within Dsui_3035 at 3250.376 kb on + strand, within Dsui_3035 at 3250.457 kb on + strand, within Dsui_3035 at 3250.476 kb on - strand, within Dsui_3035 at 3250.487 kb on + strand, within Dsui_3035 at 3250.649 kb on + strand, within Dsui_3035 at 3250.649 kb on + strand, within Dsui_3035 at 3250.657 kb on - strand, within Dsui_3035
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 3,245,874 - Dsui_3033 0.52 -1.2 3,245,889 - Dsui_3033 0.53 +0.8 3,245,935 + Dsui_3033 0.57 -0.4 3,246,241 - Dsui_3033 0.82 +0.8 3,246,299 + Dsui_3033 0.87 -0.3 3,246,364 + -0.7 3,246,372 - -0.8 3,246,428 + -0.4 3,246,446 - +0.8 3,246,507 - +0.8 3,246,558 - +0.8 3,246,563 - +0.8 3,246,564 - -1.5 3,246,570 + +0.2 3,246,693 - +0.8 3,247,108 + -0.9 3,247,111 - -0.2 3,247,143 + Dsui_3034 0.11 -1.2 3,247,167 - Dsui_3034 0.12 +0.8 3,247,269 + Dsui_3034 0.15 -1.2 3,247,277 - Dsui_3034 0.16 -1.5 3,247,277 - Dsui_3034 0.16 -1.5 3,247,428 + Dsui_3034 0.21 -1.1 3,247,436 - Dsui_3034 0.21 -0.8 3,247,436 - Dsui_3034 0.21 -0.8 3,247,496 - +0.8 3,247,588 - +0.8 3,247,697 + Dsui_3034 0.30 -1.0 3,247,705 - Dsui_3034 0.30 -0.2 3,247,724 - Dsui_3034 0.31 +0.8 3,247,731 + Dsui_3034 0.31 -1.4 3,247,787 + Dsui_3034 0.33 -0.7 3,247,814 + Dsui_3034 0.34 -1.0 3,247,864 + Dsui_3034 0.36 -1.0 3,247,989 - Dsui_3034 0.40 -0.2 3,247,991 + Dsui_3034 0.40 -0.3 3,248,013 + Dsui_3034 0.41 -0.5 3,248,063 + Dsui_3034 0.43 -0.8 3,248,068 + Dsui_3034 0.43 -1.3 3,248,068 - Dsui_3034 0.43 -1.2 3,248,123 - Dsui_3034 0.45 -0.8 3,248,125 + Dsui_3034 0.45 -0.4 3,248,162 + Dsui_3034 0.46 -0.7 3,248,200 - Dsui_3034 0.47 -0.2 3,248,350 + Dsui_3034 0.52 -0.8 3,248,358 - Dsui_3034 0.53 -1.2 3,248,387 - Dsui_3034 0.54 -0.2 3,248,459 - Dsui_3034 0.56 +0.8 3,248,460 + Dsui_3034 0.56 -1.0 3,248,475 - Dsui_3034 0.57 +0.8 3,248,489 - Dsui_3034 0.57 -0.2 3,248,547 + Dsui_3034 0.59 -1.3 3,248,644 + Dsui_3034 0.63 -0.9 3,248,644 + Dsui_3034 0.63 -1.3 3,248,644 + Dsui_3034 0.63 -0.5 3,248,652 - Dsui_3034 0.63 +0.8 3,248,880 + Dsui_3034 0.71 -0.9 3,248,888 - Dsui_3034 0.71 -1.5 3,248,909 + Dsui_3034 0.72 -1.1 3,248,917 - Dsui_3034 0.72 -1.2 3,248,917 - +0.8 3,249,066 + Dsui_3034 0.77 -1.0 3,249,094 + Dsui_3034 0.78 -1.0 3,249,102 - Dsui_3034 0.78 +0.8 3,249,123 + Dsui_3034 0.79 -0.7 3,249,268 - Dsui_3034 0.84 -0.2 3,249,293 - Dsui_3034 0.85 +0.8 3,249,404 + Dsui_3034 0.89 -1.1 3,249,431 + Dsui_3034 0.90 -0.2 3,249,439 + Dsui_3034 0.90 -0.3 3,249,604 + -0.9 3,249,728 + -0.6 3,249,759 + -0.2 3,249,798 + -0.2 3,249,806 - -1.2 3,249,984 - Dsui_3035 0.12 -0.8 3,250,014 - Dsui_3035 0.14 -0.8 3,250,061 + Dsui_3035 0.18 -0.3 3,250,061 + Dsui_3035 0.18 +0.4 3,250,120 + Dsui_3035 0.23 -0.1 3,250,338 - Dsui_3035 0.42 +0.8 3,250,376 + Dsui_3035 0.45 -0.6 3,250,457 + Dsui_3035 0.52 -0.2 3,250,476 - Dsui_3035 0.54 +0.8 3,250,487 + Dsui_3035 0.55 -0.3 3,250,649 + Dsui_3035 0.69 +0.3 3,250,649 + Dsui_3035 0.69 +0.4 3,250,657 - Dsui_3035 0.69 -0.8
Or see this region's nucleotide sequence