Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2890 and Dsui_2891 are separated by 21 nucleotides Dsui_2891 and Dsui_2892 are separated by 86 nucleotides Dsui_2892 and Dsui_2893 are separated by 67 nucleotides
Dsui_2890: Dsui_2890 - diguanylate cyclase (GGDEF) domain-containing protein, at 3,086,175 to 3,088,103
_2890
Dsui_2891: Dsui_2891 - hemerythrin-like metal-binding domain-containing protein, at 3,088,125 to 3,088,532
_2891
Dsui_2892: Dsui_2892 - phosphoribosylformylglycinamidine synthase, single chain form, at 3,088,619 to 3,092,596
_2892
Dsui_2893: Dsui_2893 - diguanylate cyclase (GGDEF) domain-containing protein, at 3,092,664 to 3,094,172
_2893
Position (kb)
3088
3089
3090
3091
3092
3093 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3087.714 kb on - strand, within Dsui_2890 at 3087.778 kb on + strand, within Dsui_2890 at 3087.873 kb on + strand, within Dsui_2890 at 3087.942 kb on + strand at 3087.983 kb on - strand at 3088.067 kb on + strand at 3088.080 kb on - strand at 3088.143 kb on - strand at 3088.144 kb on - strand at 3088.229 kb on + strand, within Dsui_2891 at 3088.420 kb on + strand, within Dsui_2891 at 3088.444 kb on + strand, within Dsui_2891 at 3088.449 kb on + strand at 3092.680 kb on - strand at 3092.963 kb on - strand, within Dsui_2893 at 3092.991 kb on + strand at 3093.092 kb on + strand, within Dsui_2893 at 3093.094 kb on - strand, within Dsui_2893 at 3093.129 kb on + strand at 3093.169 kb on - strand, within Dsui_2893 at 3093.180 kb on - strand, within Dsui_2893 at 3093.317 kb on + strand at 3093.358 kb on + strand at 3093.445 kb on - strand, within Dsui_2893
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 3,087,714 - Dsui_2890 0.80 +0.8 3,087,778 + Dsui_2890 0.83 -0.8 3,087,873 + Dsui_2890 0.88 +0.8 3,087,942 + -1.5 3,087,983 - -3.3 3,088,067 + -0.8 3,088,080 - +0.1 3,088,143 - -0.3 3,088,144 - -0.4 3,088,229 + Dsui_2891 0.25 +0.8 3,088,420 + Dsui_2891 0.72 +0.8 3,088,444 + Dsui_2891 0.78 +0.8 3,088,449 + +0.8 3,092,680 - -0.8 3,092,963 - Dsui_2893 0.20 -0.2 3,092,991 + -0.2 3,093,092 + Dsui_2893 0.28 -0.8 3,093,094 - Dsui_2893 0.28 +0.8 3,093,129 + +0.8 3,093,169 - Dsui_2893 0.33 -2.2 3,093,180 - Dsui_2893 0.34 -2.4 3,093,317 + +0.8 3,093,358 + -0.2 3,093,445 - Dsui_2893 0.52 -1.2
Or see this region's nucleotide sequence