Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2702 and Dsui_2703 are separated by 22 nucleotides Dsui_2703 and Dsui_2704 are separated by 448 nucleotides
Dsui_2702: Dsui_2702 - cell division protein, at 2,855,500 to 2,856,933
_2702
Dsui_2703: Dsui_2703 - chromosome segregation protein SMC, at 2,856,956 to 2,860,465
_2703
Dsui_2704: Dsui_2704 - yecA family protein, at 2,860,914 to 2,861,612
_2704
Position (kb)
2856
2857
2858
2859
2860
2861 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2856.054 kb on - strand, within Dsui_2702 at 2856.466 kb on - strand, within Dsui_2702 at 2856.754 kb on - strand, within Dsui_2702 at 2856.763 kb on - strand, within Dsui_2702 at 2856.970 kb on - strand at 2857.127 kb on - strand at 2857.140 kb on - strand at 2857.165 kb on - strand at 2857.186 kb on + strand at 2857.208 kb on - strand at 2857.265 kb on - strand at 2857.498 kb on - strand, within Dsui_2703 at 2857.614 kb on - strand, within Dsui_2703 at 2857.638 kb on - strand, within Dsui_2703 at 2857.934 kb on - strand, within Dsui_2703 at 2858.164 kb on - strand, within Dsui_2703 at 2858.377 kb on - strand, within Dsui_2703 at 2858.669 kb on - strand, within Dsui_2703 at 2859.854 kb on - strand, within Dsui_2703 at 2860.028 kb on - strand, within Dsui_2703 at 2860.028 kb on - strand, within Dsui_2703 at 2860.484 kb on - strand at 2860.598 kb on - strand at 2860.648 kb on + strand at 2860.899 kb on + strand at 2860.907 kb on - strand at 2860.950 kb on + strand at 2861.079 kb on + strand, within Dsui_2704 at 2861.093 kb on - strand at 2861.404 kb on + strand, within Dsui_2704 at 2861.426 kb on + strand, within Dsui_2704
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 2,856,054 - Dsui_2702 0.39 -5.4 2,856,466 - Dsui_2702 0.67 -2.0 2,856,754 - Dsui_2702 0.87 -3.9 2,856,763 - Dsui_2702 0.88 -4.1 2,856,970 - -1.3 2,857,127 - -1.6 2,857,140 - -0.8 2,857,165 - -0.7 2,857,186 + +0.8 2,857,208 - -1.4 2,857,265 - -2.3 2,857,498 - Dsui_2703 0.15 -2.4 2,857,614 - Dsui_2703 0.19 -2.4 2,857,638 - Dsui_2703 0.19 -0.8 2,857,934 - Dsui_2703 0.28 -2.2 2,858,164 - Dsui_2703 0.34 -2.5 2,858,377 - Dsui_2703 0.40 -1.7 2,858,669 - Dsui_2703 0.49 -3.6 2,859,854 - Dsui_2703 0.83 -2.5 2,860,028 - Dsui_2703 0.88 -2.0 2,860,028 - Dsui_2703 0.88 -2.9 2,860,484 - -1.5 2,860,598 - +0.4 2,860,648 + +0.8 2,860,899 + +0.9 2,860,907 - +0.8 2,860,950 + -1.0 2,861,079 + Dsui_2704 0.24 -0.4 2,861,093 - -0.2 2,861,404 + Dsui_2704 0.70 +0.1 2,861,426 + Dsui_2704 0.73 -0.8
Or see this region's nucleotide sequence