Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2613 and Dsui_2614 are separated by 48 nucleotides Dsui_2614 and Dsui_2615 overlap by 4 nucleotides
Dsui_2613: Dsui_2613 - integrating conjugative element protein, PFL_4669 family, at 2,766,194 to 2,767,207
_2613
Dsui_2614: Dsui_2614 - hypothetical protein, at 2,767,256 to 2,768,056
_2614
Dsui_2615: Dsui_2615 - hypothetical protein, at 2,768,053 to 2,769,579
_2615
Position (kb)
2767
2768
2769 Strain fitness (log2 ratio)
-2
-1
0
1 at 2766.276 kb on + strand at 2766.415 kb on + strand, within Dsui_2613 at 2766.423 kb on - strand, within Dsui_2613 at 2766.423 kb on - strand, within Dsui_2613 at 2766.423 kb on - strand, within Dsui_2613 at 2766.512 kb on + strand at 2766.519 kb on - strand, within Dsui_2613 at 2766.563 kb on - strand, within Dsui_2613 at 2766.691 kb on - strand, within Dsui_2613 at 2766.734 kb on - strand, within Dsui_2613 at 2766.797 kb on - strand, within Dsui_2613 at 2766.803 kb on - strand, within Dsui_2613 at 2766.927 kb on + strand, within Dsui_2613 at 2767.067 kb on + strand at 2767.144 kb on + strand at 2767.262 kb on - strand at 2767.597 kb on + strand, within Dsui_2614 at 2767.597 kb on + strand, within Dsui_2614 at 2767.606 kb on - strand, within Dsui_2614 at 2767.716 kb on + strand, within Dsui_2614 at 2767.764 kb on - strand, within Dsui_2614 at 2767.948 kb on - strand, within Dsui_2614 at 2767.985 kb on + strand at 2768.093 kb on + strand at 2768.185 kb on - strand at 2768.187 kb on + strand at 2768.240 kb on + strand, within Dsui_2615 at 2768.247 kb on - strand, within Dsui_2615 at 2768.247 kb on - strand, within Dsui_2615 at 2768.300 kb on + strand at 2768.467 kb on + strand, within Dsui_2615 at 2768.516 kb on + strand, within Dsui_2615 at 2768.546 kb on + strand, within Dsui_2615 at 2768.570 kb on + strand, within Dsui_2615 at 2768.570 kb on + strand, within Dsui_2615 at 2768.586 kb on + strand, within Dsui_2615 at 2768.603 kb on + strand, within Dsui_2615 at 2768.661 kb on + strand, within Dsui_2615 at 2768.674 kb on - strand, within Dsui_2615 at 2768.725 kb on + strand, within Dsui_2615 at 2768.733 kb on - strand, within Dsui_2615 at 2768.751 kb on + strand, within Dsui_2615 at 2768.751 kb on + strand, within Dsui_2615 at 2768.751 kb on + strand, within Dsui_2615 at 2768.824 kb on - strand at 2769.022 kb on - strand, within Dsui_2615
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 2,766,276 + -1.2 2,766,415 + Dsui_2613 0.22 +0.8 2,766,423 - Dsui_2613 0.23 -0.6 2,766,423 - Dsui_2613 0.23 -1.4 2,766,423 - Dsui_2613 0.23 +0.2 2,766,512 + +0.8 2,766,519 - Dsui_2613 0.32 -0.8 2,766,563 - Dsui_2613 0.36 +0.8 2,766,691 - Dsui_2613 0.49 +0.8 2,766,734 - Dsui_2613 0.53 +0.8 2,766,797 - Dsui_2613 0.59 -1.2 2,766,803 - Dsui_2613 0.60 +0.8 2,766,927 + Dsui_2613 0.72 +0.8 2,767,067 + -0.2 2,767,144 + +0.8 2,767,262 - +0.8 2,767,597 + Dsui_2614 0.43 +0.8 2,767,597 + Dsui_2614 0.43 +0.8 2,767,606 - Dsui_2614 0.44 +0.8 2,767,716 + Dsui_2614 0.57 +0.8 2,767,764 - Dsui_2614 0.63 -0.2 2,767,948 - Dsui_2614 0.86 -0.2 2,767,985 + +0.8 2,768,093 + +0.8 2,768,185 - -1.2 2,768,187 + +0.8 2,768,240 + Dsui_2615 0.12 +0.8 2,768,247 - Dsui_2615 0.13 +0.8 2,768,247 - Dsui_2615 0.13 +0.8 2,768,300 + +0.8 2,768,467 + Dsui_2615 0.27 -0.2 2,768,516 + Dsui_2615 0.30 +0.8 2,768,546 + Dsui_2615 0.32 -1.8 2,768,570 + Dsui_2615 0.34 -0.2 2,768,570 + Dsui_2615 0.34 +0.8 2,768,586 + Dsui_2615 0.35 -1.2 2,768,603 + Dsui_2615 0.36 +0.8 2,768,661 + Dsui_2615 0.40 +0.8 2,768,674 - Dsui_2615 0.41 -0.2 2,768,725 + Dsui_2615 0.44 -0.8 2,768,733 - Dsui_2615 0.45 +0.8 2,768,751 + Dsui_2615 0.46 +0.8 2,768,751 + Dsui_2615 0.46 +0.8 2,768,751 + Dsui_2615 0.46 -0.2 2,768,824 - -0.2 2,769,022 - Dsui_2615 0.63 +0.8
Or see this region's nucleotide sequence