Strain Fitness in Dechlorosoma suillum PS around Dsui_2539
Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,690,063 | - | +0.8 | |||
2,690,134 | + | -0.8 | |||
2,690,139 | + | -0.8 | |||
2,690,281 | + | Dsui_2538 | 0.28 | -0.2 | |
2,690,288 | - | Dsui_2538 | 0.29 | +0.8 | |
2,690,288 | - | +0.8 | |||
2,690,373 | + | Dsui_2538 | 0.40 | -1.3 | |
2,690,380 | + | Dsui_2538 | 0.41 | -0.8 | |
2,690,388 | - | Dsui_2538 | 0.42 | -0.2 | |
2,690,388 | - | Dsui_2538 | 0.42 | +0.8 | |
2,690,397 | + | Dsui_2538 | 0.44 | -0.8 | |
2,690,508 | + | Dsui_2538 | 0.59 | -1.0 | |
2,690,576 | - | +0.8 | |||
2,690,640 | + | Dsui_2538 | 0.76 | -0.9 | |
2,690,667 | + | Dsui_2538 | 0.80 | -1.2 | |
2,690,675 | - | Dsui_2538 | 0.81 | -1.2 | |
2,690,711 | + | Dsui_2538 | 0.86 | -0.9 | |
2,690,737 | + | Dsui_2538 | 0.89 | -0.4 | |
2,690,742 | - | -0.2 | |||
2,690,747 | + | -0.1 | |||
2,690,747 | + | -0.9 | |||
2,690,811 | - | +0.8 | |||
2,690,821 | + | -0.7 | |||
2,690,964 | + | -0.0 | |||
2,690,994 | + | -0.7 | |||
2,691,046 | - | Dsui_2539 | 0.14 | +0.2 | |
2,691,280 | + | Dsui_2539 | 0.55 | -0.1 | |
2,691,344 | + | Dsui_2539 | 0.67 | -1.3 | |
2,691,462 | - | Dsui_2539 | 0.88 | -1.5 | |
2,691,550 | + | -0.5 | |||
2,691,579 | + | -0.3 | |||
2,692,216 | + | Dsui_2540 | 0.49 | +0.2 | |
2,692,311 | + | Dsui_2540 | 0.56 | +0.0 |
Or see this region's nucleotide sequence